Variant report

Variant rs549491602
Chromosome Location chr7:57927832-57927833
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:57927000-57928200 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr7:57927400-57929200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
3 chr7:57927600-57928000 Bivalent/Poised TSS Aorta Aorta
4 chr7:57927600-57928000 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
5 chr7:57927600-57928200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
6 chr7:57927600-57928200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr7:57927600-57928200 Bivalent/Poised TSS Stomach Smooth Muscle stomach
8 chr7:57927600-57928200 Flanking Bivalent TSS/Enh HMEC breast
9 chr7:57927600-57928400 Bivalent/Poised TSS Muscle Satellite Cultured Cells --
10 chr7:57927600-57928400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr7:57927600-57928400 Bivalent/Poised TSS Brain Substantia Nigra brain
12 chr7:57927600-57928400 Flanking Bivalent TSS/Enh Placenta Placenta
13 chr7:57927600-57928600 Bivalent/Poised TSS Cortex derived primary cultured neurospheres brain
14 chr7:57927600-57928600 Bivalent/Poised TSS Colon Smooth Muscle Colon
15 chr7:57927600-57928600 ZNF genes & repeats Spleen Spleen
16 chr7:57927600-57928800 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
17 chr7:57927600-57928800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
18 chr7:57927600-57928800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
19 chr7:57927600-57928800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
20 chr7:57927600-57928800 Bivalent/Poised TSS Brain Hippocampus Middle brain
21 chr7:57927600-57928800 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
22 chr7:57927600-57928800 Active TSS Rectal Smooth Muscle rectum
23 chr7:57927600-57929000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
24 chr7:57927600-57929000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr7:57927600-57929000 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
26 chr7:57927600-57929000 ZNF genes & repeats Lung lung
27 chr7:57927600-57929000 Bivalent/Poised TSS Ovary ovary
28 chr7:57927600-57929000 Active TSS Pancreas Pancrea
29 chr7:57927600-57929000 Active TSS A549 lung
30 chr7:57927600-57929200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr7:57927600-57929200 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr7:57927600-57929200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr7:57927600-57929200 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
34 chr7:57927600-57929200 Bivalent/Poised TSS Psoas Muscle Psoas
35 chr7:57927600-57929200 ZNF genes & repeats HepG2 liver
36 chr7:57927600-57929400 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
37 chr7:57927800-57928000 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr7:57927800-57928000 Flanking Bivalent TSS/Enh Primary mononuclear cells fromperipheralblood Blood
39 chr7:57927800-57928000 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
40 chr7:57927800-57928000 Flanking Bivalent TSS/Enh Left Ventricle heart
41 chr7:57927800-57928000 Flanking Bivalent TSS/Enh Right Atrium heart
42 chr7:57927800-57928000 Flanking Bivalent TSS/Enh Right Ventricle heart
43 chr7:57927800-57928200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr7:57927800-57928400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells blood
45 chr7:57927800-57928400 Bivalent/Poised TSS Primary T regulatory cells fromperipheralblood blood
46 chr7:57927800-57928400 ZNF genes & repeats Gastric stomach
47 chr7:57927800-57928600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr7:57927800-57928800 Active TSS Primary T cells from cord blood blood
49 chr7:57927800-57928800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr7:57927800-57928800 Bivalent/Poised TSS Fetal Stomach stomach

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