Variant report

Variant	rs549549894
Chromosome Location	chr1:165422772-165422773
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2756868	chr1:165417526-165425536	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2758974	chr1:165417526-165425536	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv8524	chr1:165421277-165424974	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv2764223	chr1:165421628-165424170	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3452544	chr1:165421640-165424380	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3452545	chr1:165421640-165424380	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv12585	chr1:165421804-165424209	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv2421711	chr1:165421874-165424170	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv441718	chr1:165421874-165424170	Flanking Active TSS Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165420400-165424400	Enhancers	Fetal Muscle Leg	muscle
2	chr1:165421800-165423200	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr1:165422000-165423000	Weak transcription	HSMMtube	muscle
4	chr1:165422000-165423200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr1:165422000-165423200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:165422000-165423200	Enhancers	Left Ventricle	heart
7	chr1:165422200-165433200	Weak transcription	Right Ventricle	heart
8	chr1:165422400-165423600	Weak transcription	Fetal Muscle Trunk	muscle
9	chr1:165422400-165423800	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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