Variant report

Variant rs549566300
Chromosome Location chr1:95135346-95135347
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95126800-95137800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr1:95126800-95141600 Weak transcription Pancreas Pancrea
3 chr1:95126800-95164200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:95128400-95154600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:95131400-95135400 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr1:95131800-95135600 Enhancers HUES6 Cell Line embryonic stem cell
7 chr1:95133400-95135400 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr1:95133400-95135600 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr1:95133400-95136000 Enhancers iPS-20b Cell Line embryonic stem cell
10 chr1:95133400-95141200 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr1:95133600-95141600 Weak transcription Duodenum Mucosa Duodenum
12 chr1:95133800-95136200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:95133800-95136200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:95133800-95137400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:95134000-95142800 Weak transcription Small Intestine intestine
16 chr1:95134200-95135400 Enhancers Stomach Mucosa stomach
17 chr1:95134200-95135800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:95134400-95135600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:95134400-95136000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:95134400-95137400 Weak transcription Fetal Intestine Small intestine
21 chr1:95134400-95141600 Weak transcription Gastric stomach
22 chr1:95134600-95135600 Enhancers Placenta Amnion Placenta Amnion
23 chr1:95134800-95135400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:95134800-95135400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:95134800-95135400 Enhancers HSMM muscle
26 chr1:95134800-95135600 Enhancers ES-I3 Cell Line embryonic stem cell
27 chr1:95134800-95139800 Weak transcription Primary hematopoietic stem cells blood
28 chr1:95135000-95136000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr1:95135000-95136200 Weak transcription HepG2 liver
30 chr1:95135000-95136800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:95135000-95154400 Weak transcription NHLF lung
32 chr1:95135200-95136000 Weak transcription Hela-S3 cervix
33 chr1:95135200-95137400 Weak transcription Fetal Intestine Large intestine
34 chr1:95135200-95137400 Weak transcription NH-A brain
35 chr1:95135200-95144200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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