Variant report

Variant	rs549587837
Chromosome Location	chr6:82740467-82740468
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034389	chr6:82721569-82746599	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1021464	chr6:82738920-82876526	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:82732400-82748600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:82733200-82743800	Weak transcription	HSMM	muscle
3	chr6:82735600-82740600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr6:82736600-82743200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:82738600-82740800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:82739200-82740800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr6:82739200-82741400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr6:82739600-82740800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:82739600-82741000	Enhancers	HMEC	breast
10	chr6:82739800-82741000	Enhancers	NHEK	skin
11	chr6:82739800-82741600	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr6:82739800-82741800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr6:82740000-82741000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr6:82740200-82740600	Enhancers	Brain Substantia Nigra	brain
15	chr6:82740200-82740600	Enhancers	Right Atrium	heart
16	chr6:82740200-82740600	Enhancers	NHDF-Ad	bronchial
17	chr6:82740200-82741000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr6:82740400-82740600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr6:82740400-82740600	Enhancers	Aorta	Aorta
20	chr6:82740400-82740600	Enhancers	Left Ventricle	heart
21	chr6:82740400-82740600	Enhancers	HepG2	liver
22	chr6:82740400-82740800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr6:82740400-82740800	Enhancers	HUVEC	blood vessel
24	chr6:82740400-82741000	Enhancers	Muscle Satellite Cultured Cells	--
25	chr6:82740400-82741000	Enhancers	Brain Hippocampus Middle	brain

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