Variant report

Variant	rs549632128
Chromosome Location	chr15:31724088-31724089
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054147	chr15:31014507-31972706	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv542306	chr15:31014507-31972706	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv932896	chr15:31292475-31730445	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
4	esv34100	chr15:31496514-31792591	Active TSS Enhancers ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
5	nsv903840	chr15:31589970-31800149	Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
6	esv3311082	chr15:31724008-31726085	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3311081	chr15:31724038-31726073	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3311083	chr15:31724038-31726073	Enhancers Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:31712800-31732800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr15:31720200-31725600	Weak transcription	NHDF-Ad	bronchial
3	chr15:31722800-31724600	Enhancers	Primary T helper cells PMA-I stimulated	--
4	chr15:31723200-31725200	Weak transcription	Primary T cells from cord blood	blood
5	chr15:31723400-31724400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr15:31723800-31725200	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr15:31723800-31726800	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr15:31724000-31724200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr15:31724000-31724200	Enhancers	Lung	lung
10	chr15:31724000-31724200	Enhancers	Spleen	Spleen
11	chr15:31724000-31724600	Enhancers	Primary neutrophils fromperipheralblood	blood
12	chr15:31724000-31724800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr15:31724000-31726400	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr15:31724000-31726600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr15:31724000-31727000	Enhancers	Fetal Thymus	thymus

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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