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Variant report
Variant
rs549717301
Chromosome Location
chr6:12514224-12514225
allele
A/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:4)
CpG islands (count:0)
Chromatin interactive region (count:0)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
(count:4 , 50 per page) page:
1
No.
Transcrition factor
Chromosome Location
Cell Line
Cell type
Cell Stage
Matched TF binding sites
1
POLR2A
chr6:12514097-12514963
GM12892
blood:
n/a
n/a
2
HEY1
chr6:12514212-12514586
K562
blood:
n/a
n/a
3
POLR2A
chr6:12514189-12515116
H1-hESC
embryonic stem cell:
n/a
n/a
4
POLR2A
chr6:12514164-12515010
GM12892
blood:
n/a
n/a
No data
No data
No data
No data
No data
Variant related genes
Relation type
RPL15P3
TF binding region
Extended variants information (count: 3 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv970077
chr6:12514065-12515389
Inactive region
TF binding regionCpG island
1 gene(s)
inside rSNPs
diseases
2
esv994399
chr6:12514215-12514238
Inactive region
TF binding region
1 gene(s)
inside rSNPs
n/a
3
esv989682
chr6:12514221-12514238
Inactive region
TF binding region
1 gene(s)
inside rSNPs
n/a
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links