Variant report
| Variant | rs549721757 |
|---|---|
| Chromosome Location | chr13:49064198-49064199 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr13:49023800-49073800 | Weak transcription | NH-A | brain |
| 2 | chr13:49025600-49066200 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr13:49028000-49071000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr13:49030600-49070600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr13:49031600-49066200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 6 | chr13:49031800-49065400 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr13:49032000-49065600 | Weak transcription | Brain Anterior Caudate | brain |
| 8 | chr13:49032000-49066200 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr13:49032400-49066200 | Weak transcription | Spleen | Spleen |
| 10 | chr13:49032400-49066600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr13:49032400-49066600 | Weak transcription | Ovary | ovary |
| 12 | chr13:49032400-49067400 | Weak transcription | Pancreas | Pancrea |
| 13 | chr13:49032400-49067600 | Weak transcription | Gastric | stomach |
| 14 | chr13:49032800-49066200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr13:49034400-49073800 | Weak transcription | Esophagus | oesophagus |
| 16 | chr13:49035200-49073400 | Weak transcription | Fetal Intestine Small | intestine |
| 17 | chr13:49035600-49065400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 18 | chr13:49035600-49066000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 19 | chr13:49035800-49066400 | Weak transcription | NHEK | skin |
| 20 | chr13:49049800-49066200 | Weak transcription | Lung | lung |
| 21 | chr13:49050000-49065600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 22 | chr13:49051200-49064800 | Weak transcription | Brain Hippocampus Middle | brain |
| 23 | chr13:49051800-49065400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 24 | chr13:49052800-49064800 | Weak transcription | Liver | Liver |
| 25 | chr13:49053600-49071200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr13:49053800-49066600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr13:49054000-49094000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 28 | chr13:49054200-49064800 | Weak transcription | Thymus | Thymus |
| 29 | chr13:49054200-49066600 | Weak transcription | Aorta | Aorta |
| 30 | chr13:49054400-49064800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 31 | chr13:49054400-49065600 | Weak transcription | HUVEC | blood vessel |
| 32 | chr13:49054400-49065800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 33 | chr13:49054400-49065800 | Weak transcription | NHLF | lung |
| 34 | chr13:49054400-49066200 | Weak transcription | Brain Angular Gyrus | brain |
| 35 | chr13:49054400-49066200 | Weak transcription | Placenta | Placenta |
| 36 | chr13:49054400-49066200 | Weak transcription | HSMMtube | muscle |
| 37 | chr13:49054400-49066400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 38 | chr13:49054400-49066600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 39 | chr13:49054600-49065600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 40 | chr13:49054600-49065600 | Weak transcription | Osteobl | bone |
| 41 | chr13:49054600-49066000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 42 | chr13:49054600-49066200 | Weak transcription | HMEC | breast |
| 43 | chr13:49055000-49065600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 44 | chr13:49056600-49065600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 45 | chr13:49057400-49064600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 46 | chr13:49057400-49068400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr13:49058800-49065400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 48 | chr13:49060400-49064600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 49 | chr13:49060600-49067400 | Weak transcription | Stomach Mucosa | stomach |
| 50 | chr13:49061200-49065400 | Weak transcription | Small Intestine | intestine |
