| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1002793 |
chr2:48771220-49466550 |
ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Strong transcription Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1004965 |
chr2:48796170-49443587 |
Bivalent Enhancer Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv535684 |
chr2:48796170-49443587 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv498119 |
chr2:48808834-49422647 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv874007 |
chr2:49102526-49321164 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv834003 |
chr2:49131673-49312273 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv874010 |
chr2:49230413-49393382 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv999566 |
chr2:49247737-49430060 |
Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv2720 |
chr2:49273178-49317890 |
Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats
|
miRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv1008909 |
chr2:49281630-49571619 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv581792 |
chr2:49287783-49321164 |
Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
nsv993555 |
chr2:49299168-49781707 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv527059 |
chr2:49305933-49321164 |
Weak transcription Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
