The 2.0 version of rSNPBase

Variant report

Variant rs549823389
Chromosome Location chr8:100252825-100252826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100207000-100290400 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr8:100212600-100253000 Weak transcription Lung lung
3 chr8:100214800-100293200 Weak transcription Primary T cells fromperipheralblood blood
4 chr8:100230400-100257800 Weak transcription Aorta Aorta
5 chr8:100231000-100253000 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr8:100231000-100255400 Weak transcription Right Ventricle heart
7 chr8:100231200-100253000 Weak transcription Gastric stomach
8 chr8:100232000-100267400 Weak transcription Left Ventricle heart
9 chr8:100236400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr8:100236800-100253000 Weak transcription Osteobl bone
11 chr8:100241200-100255400 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr8:100243200-100253000 Weak transcription Brain Substantia Nigra brain
13 chr8:100243400-100253000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr8:100244400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr8:100244400-100253000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr8:100246400-100253000 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr8:100246400-100288200 Weak transcription Primary T cells from cord blood blood
18 chr8:100246600-100253000 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr8:100246600-100253000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr8:100246600-100253000 Weak transcription Dnd41 blood
21 chr8:100246600-100253200 Weak transcription Fetal Lung lung
22 chr8:100246600-100253200 Weak transcription NHLF lung
23 chr8:100246600-100256200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr8:100246600-100261000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr8:100246600-100267000 Weak transcription Primary B cells from cord blood blood
26 chr8:100246800-100253000 Weak transcription Fetal Intestine Large intestine
27 chr8:100246800-100253000 Weak transcription Fetal Muscle Leg muscle
28 chr8:100246800-100253200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr8:100246800-100253200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr8:100246800-100253200 Weak transcription Fetal Stomach stomach
31 chr8:100246800-100261000 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr8:100246800-100262000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr8:100246800-100266800 Weak transcription Fetal Intestine Small intestine
34 chr8:100251600-100253000 Weak transcription NHDF-Ad bronchial
35 chr8:100251600-100253600 Enhancers GM12878-XiMat blood
36 chr8:100251600-100260000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr8:100251800-100253000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr8:100252000-100269200 Weak transcription Ovary ovary
39 chr8:100252200-100253400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr8:100252400-100253200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr8:100252600-100253000 Weak transcription HSMM muscle
42 chr8:100252600-100253000 Enhancers HUVEC blood vessel
43 chr8:100252600-100253400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr8:100252600-100253400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr8:100252600-100253600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr8:100252800-100253200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr8:100252800-100253400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr8:100252800-100253400 Enhancers Thymus Thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015