Variant report

Variant	rs549845562
Chromosome Location	chr7:13591289-13591290
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023580	chr7:13403531-13624975	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv8050	chr7:13585517-13591877	Enhancers	n/a	n/a	inside rSNPs	diseases
3	esv2764052	chr7:13587412-13591674	Enhancers	n/a	n/a	inside rSNPs	diseases
4	nsv606267	chr7:13590568-13591302	Enhancers	n/a	n/a	inside rSNPs	diseases
5	nsv606268	chr7:13590568-13591363	Enhancers	n/a	n/a	inside rSNPs	diseases
6	nsv606269	chr7:13590568-13591573	Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv1815242	chr7:13591076-13633151	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv887690	chr7:13591197-13702169	Enhancers Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:13590600-13591400	Enhancers	Psoas Muscle	Psoas
2	chr7:13590800-13591600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:13590800-13592000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr7:13591000-13591800	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr7:13591000-13592000	Enhancers	HSMMtube	muscle
6	chr7:13591200-13591800	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr7:13591200-13592000	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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