Variant report
| Variant | rs549892818 |
|---|---|
| Chromosome Location | chr6:12319855-12319856 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:12315200-12327800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 2 | chr6:12317600-12320000 | ZNF genes & repeats | A549 | lung |
| 3 | chr6:12319000-12320000 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr6:12319200-12324600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 5 | chr6:12319400-12320200 | Enhancers | GM12878-XiMat | blood |
| 6 | chr6:12319400-12324200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr6:12319400-12324400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 8 | chr6:12319400-12324400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr6:12319400-12325600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 10 | chr6:12319600-12324400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 11 | chr6:12319800-12324400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
