Variant report

Variant rs549949748
Chromosome Location chr21:46742577-46742578
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46736400-46744000 Enhancers Lung lung
2 chr21:46736800-46743200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr21:46737000-46745600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr21:46737000-46747200 Enhancers Fetal Muscle Leg muscle
5 chr21:46737800-46743000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr21:46738000-46742600 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr21:46738200-46742800 Weak transcription HMEC breast
8 chr21:46738200-46745200 Enhancers Adipose Nuclei Adipose
9 chr21:46739200-46742600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr21:46740000-46742800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr21:46740000-46742800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
12 chr21:46740200-46743400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr21:46740400-46742800 Weak transcription Fetal Intestine Large intestine
14 chr21:46740400-46748400 Weak transcription Fetal Intestine Small intestine
15 chr21:46740600-46742600 Enhancers A549 lung
16 chr21:46740600-46742800 Weak transcription NHLF lung
17 chr21:46740600-46743800 Weak transcription Stomach Mucosa stomach
18 chr21:46740600-46745000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
19 chr21:46740600-46747600 Bivalent Enhancer Fetal Muscle Trunk muscle
20 chr21:46740800-46743200 Weak transcription Rectal Smooth Muscle rectum
21 chr21:46740800-46743600 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr21:46740800-46743800 Weak transcription Left Ventricle heart
23 chr21:46740800-46744000 Bivalent Enhancer Fetal Stomach stomach
24 chr21:46740800-46744200 Weak transcription Colon Smooth Muscle Colon
25 chr21:46741000-46743000 Weak transcription Right Atrium heart
26 chr21:46741000-46743600 Enhancers Hela-S3 cervix
27 chr21:46741000-46744200 Enhancers HSMM muscle
28 chr21:46741400-46743000 Weak transcription HSMMtube muscle
29 chr21:46741400-46743800 Enhancers HUES48 Cell Line embryonic stem cell
30 chr21:46741400-46744200 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr21:46741400-46746400 Bivalent Enhancer Placenta Placenta
32 chr21:46741600-46743200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr21:46741600-46744000 Enhancers Primary T cells from cord blood blood
34 chr21:46741600-46744200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr21:46741600-46744200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr21:46741600-46744400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr21:46741600-46744600 Weak transcription Fetal Heart heart
38 chr21:46741600-46747000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
39 chr21:46741800-46742600 Enhancers Primary hematopoietic stem cells blood
40 chr21:46741800-46742800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr21:46741800-46742800 Weak transcription NHDF-Ad bronchial
42 chr21:46741800-46743200 Weak transcription Aorta Aorta
43 chr21:46741800-46743400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
44 chr21:46741800-46747800 Enhancers Pancreas Pancrea
45 chr21:46742000-46742600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
46 chr21:46742000-46742600 Enhancers Rectal Mucosa Donor 29 rectum
47 chr21:46742000-46742800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
48 chr21:46742000-46743000 Enhancers Primary B cells from peripheral blood blood
49 chr21:46742000-46743000 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
50 chr21:46742000-46743000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood

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