The 2.0 version of rSNPBase

Variant report

Variant rs550013307
Chromosome Location chr11:76290098-76290099
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:76282800-76291000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr11:76285600-76291600 Enhancers Placenta Placenta
3 chr11:76285800-76292200 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr11:76287000-76291000 Enhancers Fetal Stomach stomach
5 chr11:76287000-76291400 Enhancers Placenta Amnion Placenta Amnion
6 chr11:76287400-76291200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:76287800-76291000 Enhancers Muscle Satellite Cultured Cells --
8 chr11:76287800-76291200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
9 chr11:76287800-76291200 Enhancers Left Ventricle heart
10 chr11:76288000-76290400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr11:76288000-76290600 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr11:76288000-76290600 Enhancers Stomach Smooth Muscle stomach
13 chr11:76288000-76290800 Enhancers NH-A brain
14 chr11:76288000-76291000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr11:76288000-76291200 Enhancers NHDF-Ad bronchial
16 chr11:76288000-76291600 Enhancers HUES6 Cell Line embryonic stem cell
17 chr11:76288200-76291000 Enhancers Fetal Kidney kidney
18 chr11:76288200-76291000 Enhancers NHLF lung
19 chr11:76288200-76291200 Enhancers Fetal Muscle Trunk muscle
20 chr11:76288200-76291200 Enhancers Fetal Muscle Leg muscle
21 chr11:76288200-76291400 Enhancers Skeletal Muscle Female skeletal muscle
22 chr11:76288200-76291600 Enhancers Right Atrium heart
23 chr11:76288400-76290400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr11:76288400-76290400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr11:76288400-76291200 Enhancers Esophagus oesophagus
26 chr11:76288600-76291200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr11:76288600-76291600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr11:76288800-76290600 Weak transcription Duodenum Mucosa Duodenum
29 chr11:76288800-76290600 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr11:76289000-76290800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr11:76289000-76291200 Enhancers Fetal Heart heart
32 chr11:76289000-76291200 Enhancers HSMMtube muscle
33 chr11:76289200-76290200 Enhancers Hela-S3 cervix
34 chr11:76289200-76290200 Weak transcription HSMM muscle
35 chr11:76289200-76291200 Enhancers H1 Cell Line embryonic stem cell
36 chr11:76289200-76291600 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr11:76289400-76290200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr11:76289400-76290200 Weak transcription Fetal Intestine Small intestine
39 chr11:76289400-76290400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr11:76289400-76290400 Enhancers HUES64 Cell Line embryonic stem cell
41 chr11:76289400-76290400 Enhancers NHEK skin
42 chr11:76289400-76290800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr11:76289400-76291200 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr11:76289600-76290200 Flanking Active TSS HUVEC blood vessel
45 chr11:76289600-76290600 Weak transcription Lung lung
46 chr11:76289600-76290600 Weak transcription Stomach Mucosa stomach
47 chr11:76289600-76290600 Flanking Active TSS Osteobl bone
48 chr11:76289600-76290800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr11:76289800-76290200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr11:76289800-76290200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015