Variant report

Variant rs550015
Chromosome Location chr11:65186348-65186349
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:65181400-65189400 Weak transcription Ovary ovary
2 chr11:65182200-65189600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
3 chr11:65182400-65188600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
4 chr11:65183000-65189200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
5 chr11:65183000-65189400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr11:65183200-65186800 Enhancers Fetal Brain Male brain
7 chr11:65183200-65186800 Enhancers Fetal Heart heart
8 chr11:65183200-65187200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
9 chr11:65183200-65188000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr11:65183400-65188600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr11:65183400-65188600 Flanking Active TSS Hela-S3 cervix
12 chr11:65183400-65189200 Flanking Active TSS Brain Anterior Caudate brain
13 chr11:65183400-65189200 Flanking Active TSS Brain Inferior Temporal Lobe brain
14 chr11:65183400-65189400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
15 chr11:65183400-65189400 Flanking Active TSS Stomach Smooth Muscle stomach
16 chr11:65183400-65189600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
17 chr11:65183400-65189600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr11:65183400-65190200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr11:65183600-65186600 Enhancers Placenta Amnion Placenta Amnion
20 chr11:65183600-65187400 Flanking Active TSS Rectal Smooth Muscle rectum
21 chr11:65183600-65188000 Flanking Active TSS Brain Cingulate Gyrus brain
22 chr11:65183600-65188000 Flanking Active TSS Brain Hippocampus Middle brain
23 chr11:65183600-65188600 Flanking Active TSS Muscle Satellite Cultured Cells --
24 chr11:65183600-65188600 Flanking Active TSS Adipose Nuclei Adipose
25 chr11:65183600-65188600 Flanking Active TSS Colonic Mucosa Colon
26 chr11:65183600-65188600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
27 chr11:65183600-65189000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr11:65183600-65189200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
29 chr11:65183600-65189400 Flanking Active TSS GM12878-XiMat blood
30 chr11:65183600-65189600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
31 chr11:65183600-65189600 Flanking Active TSS Primary T cells fromperipheralblood blood
32 chr11:65183600-65189600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
33 chr11:65183600-65189600 Flanking Active TSS Dnd41 blood
34 chr11:65183600-65189800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
35 chr11:65183600-65194200 Flanking Active TSS Primary B cells from cord blood blood
36 chr11:65183800-65186400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
37 chr11:65183800-65187000 Flanking Active TSS Thymus Thymus
38 chr11:65183800-65187200 Flanking Active TSS Primary B cells from peripheral blood blood
39 chr11:65183800-65188600 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
40 chr11:65183800-65188800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
41 chr11:65183800-65189600 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr11:65183800-65189600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
43 chr11:65184000-65186400 Enhancers HUES48 Cell Line embryonic stem cell
44 chr11:65184000-65187200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
45 chr11:65184000-65187200 Flanking Active TSS NHDF-Ad bronchial
46 chr11:65184000-65187800 Enhancers Cortex derived primary cultured neurospheres brain
47 chr11:65184000-65187800 Flanking Active TSS Fetal Thymus thymus
48 chr11:65184000-65189200 Enhancers H1 Cell Line embryonic stem cell
49 chr11:65184200-65187000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
50 chr11:65184200-65188800 Enhancers HUES64 Cell Line embryonic stem cell

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