| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv2752273 |
chr9:1062218-1824888 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription
|
TF binding regionChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1016148 |
chr9:1457605-2361750 |
Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv539916 |
chr9:1457605-2361750 |
Weak transcription Genic enhancers Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1021712 |
chr9:1647840-2216839 |
Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv539921 |
chr9:1647840-2216839 |
Bivalent Enhancer Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv892043 |
chr9:1777728-1872709 |
Enhancers Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv892044 |
chr9:1777728-1894388 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv1025139 |
chr9:1817851-1892815 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv539923 |
chr9:1817851-1892815 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015