Variant report

Variant	rs550166196
Chromosome Location	chr15:54811588-54811589
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817539	chr15:54132584-55095235	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv1038660	chr15:54756184-55039913	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	2 gene(s)	inside rSNPs	diseases
3	esv275383	chr15:54810814-54814852	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:54807000-54820600	Weak transcription	Fetal Brain Male	brain
2	chr15:54809000-54814000	Weak transcription	Ovary	ovary
3	chr15:54809600-54811800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr15:54809600-54814400	Enhancers	Fetal Lung	lung
5	chr15:54809800-54811600	Enhancers	Primary hematopoietic stem cells	blood
6	chr15:54809800-54811800	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr15:54810200-54812000	Enhancers	Adipose Nuclei	Adipose
8	chr15:54811000-54811600	Enhancers	Primary T cells from cord blood	blood
9	chr15:54811000-54812200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr15:54811000-54812600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr15:54811000-54869600	Weak transcription	Aorta	Aorta
12	chr15:54811200-54811600	Weak transcription	Fetal Kidney	kidney
13	chr15:54811200-54811600	Weak transcription	GM12878-XiMat	blood
14	chr15:54811200-54811800	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr15:54811200-54812400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr15:54811400-54811600	Enhancers	Primary B cells from cord blood	blood
17	chr15:54811400-54812000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
18	chr15:54811400-54812200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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