Variant report

Variant	rs550231390
Chromosome Location	chr14:68614257-68614258
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68610876..68614482-chr14:68656921..68659073,4	MCF-7	breast:
2	chr14:68612521..68615403-chr14:68749154..68751195,2	MCF-7	breast:
3	chr14:68611791..68614328-chr14:68697550..68699528,2	MCF-7	breast:
4	chr14:68405927..68407979-chr14:68613878..68615812,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv1048794	chr14:68614152-68649231	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68601800-68614400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:68601800-68614800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr14:68601800-68615600	Enhancers	HMEC	breast
4	chr14:68603800-68614400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr14:68603800-68614600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr14:68603800-68614800	Enhancers	HSMM	muscle
7	chr14:68604200-68614800	Enhancers	NHLF	lung
8	chr14:68605000-68614800	Enhancers	Muscle Satellite Cultured Cells	--
9	chr14:68606800-68614800	Enhancers	NHDF-Ad	bronchial
10	chr14:68607200-68623600	Weak transcription	Ovary	ovary
11	chr14:68607600-68615000	Enhancers	NHEK	skin
12	chr14:68607800-68616600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr14:68609800-68614800	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr14:68610200-68614400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:68611000-68614400	Enhancers	Rectal Smooth Muscle	rectum
16	chr14:68612000-68614400	Weak transcription	Pancreatic Islets	Pancreatic Islet
17	chr14:68612200-68615200	Weak transcription	Fetal Thymus	thymus
18	chr14:68612200-68616600	Weak transcription	Thymus	Thymus
19	chr14:68612600-68614800	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr14:68612600-68628000	Weak transcription	Rectal Mucosa Donor 31	rectum
21	chr14:68612800-68614400	Enhancers	Placenta Amnion	Placenta Amnion
22	chr14:68613000-68614400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr14:68613000-68631200	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr14:68613200-68614800	Enhancers	Hela-S3	cervix
25	chr14:68613600-68614400	Enhancers	Osteobl	bone
26	chr14:68613600-68615000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr14:68613600-68615000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr14:68613800-68615400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr14:68614000-68614600	Weak transcription	Primary T cells from cord blood	blood
30	chr14:68614000-68614800	Weak transcription	A549	lung
31	chr14:68614000-68615200	Weak transcription	Fetal Lung	lung
32	chr14:68614200-68614400	Enhancers	Duodenum Mucosa	Duodenum
33	chr14:68614200-68614800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr14:68614200-68614800	Enhancers	HSMMtube	muscle
35	chr14:68614200-68622400	Weak transcription	Colon Smooth Muscle	Colon

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