The 2.0 version of rSNPBase

Variant report

Variant rs550282210
Chromosome Location chr4:56040011-56040012
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56035800-56042200 Weak transcription Right Atrium heart
2 chr4:56036000-56050600 Weak transcription Pancreas Pancrea
3 chr4:56036200-56041800 Weak transcription H9 Cell Line embryonic stem cell
4 chr4:56036200-56044400 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr4:56036800-56044600 Weak transcription Stomach Mucosa stomach
6 chr4:56037800-56042200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr4:56038600-56040200 Enhancers Hela-S3 cervix
8 chr4:56038600-56040200 Enhancers NH-A brain
9 chr4:56038600-56040600 Enhancers Muscle Satellite Cultured Cells --
10 chr4:56038600-56041600 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr4:56038600-56041600 Enhancers NHDF-Ad bronchial
12 chr4:56038800-56042000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr4:56039000-56040200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:56039000-56040200 Enhancers NHLF lung
15 chr4:56039000-56040400 Enhancers Osteobl bone
16 chr4:56039200-56040200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr4:56039200-56040800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr4:56039200-56041800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr4:56039200-56041800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr4:56039400-56041600 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr4:56039400-56041600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr4:56039400-56041800 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr4:56039400-56042200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr4:56039400-56043800 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr4:56039600-56040200 Enhancers HSMM muscle
26 chr4:56039600-56040800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr4:56039600-56041400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:56039600-56041600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr4:56039600-56041600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr4:56039600-56041600 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr4:56039600-56041600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr4:56039600-56042000 Enhancers HUVEC blood vessel
33 chr4:56039600-56042200 Weak transcription Placenta Placenta
34 chr4:56039600-56043800 Weak transcription Fetal Muscle Leg muscle
35 chr4:56039800-56041000 Weak transcription Placenta Amnion Placenta Amnion
36 chr4:56039800-56041600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr4:56040000-56041400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr4:56040000-56041400 Weak transcription HMEC breast
39 chr4:56040000-56041600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:56040000-56041600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr4:56040000-56041600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:56040000-56041600 Weak transcription NHEK skin

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Last update: Aug 31, 2015