Variant report

Variant	rs550354238
Chromosome Location	chr10:45072892-45072893
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422287	chr10:45044161-45257684	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1042549	chr10:45071890-45117466	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45069400-45074000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
2	chr10:45070400-45073600	Enhancers	Fetal Muscle Trunk	muscle
3	chr10:45071600-45073800	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr10:45071800-45074000	Enhancers	Muscle Satellite Cultured Cells	--
5	chr10:45072000-45073000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:45072000-45073800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr10:45072200-45081600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:45072400-45073600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr10:45072600-45073400	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr10:45072800-45073000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr10:45072800-45073200	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr10:45072800-45073200	Weak transcription	NHDF-Ad	bronchial
13	chr10:45072800-45073400	Weak transcription	Ovary	ovary
14	chr10:45072800-45076400	Weak transcription	Fetal Muscle Leg	muscle
15	chr10:45072800-45076600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr10:45072800-45077200	Weak transcription	HSMMtube	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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