Variant report

Variant	rs550367191
Chromosome Location	chr11:45685958-45685959
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897311	chr11:45663568-45691118	Bivalent Enhancer Enhancers Active TSS Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv897312	chr11:45663568-45699134	Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv897313	chr11:45670395-45699134	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv467870	chr11:45684557-45757401	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
5	nsv554199	chr11:45684557-45757401	Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
6	esv19367	chr11:45685695-45687403	Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	n/a
7	esv3333567	chr11:45685776-45688474	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45680000-45688000	Enhancers	Fetal Brain Male	brain
2	chr11:45680200-45686000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:45682000-45686200	Flanking Active TSS	Fetal Brain Female	brain
4	chr11:45682400-45686600	Bivalent Enhancer	Fetal Lung	lung
5	chr11:45683000-45686200	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr11:45683400-45686000	Bivalent Enhancer	Placenta	Placenta
7	chr11:45683400-45686200	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr11:45684200-45686200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr11:45684200-45686400	Flanking Active TSS	HUVEC	blood vessel
10	chr11:45684400-45686200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr11:45684400-45686200	Enhancers	Placenta Amnion	Placenta Amnion
12	chr11:45684400-45686200	Bivalent Enhancer	NHLF	lung
13	chr11:45684600-45686000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr11:45684600-45686600	Bivalent Enhancer	Fetal Thymus	thymus
15	chr11:45684800-45686000	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
16	chr11:45684800-45686600	Flanking Bivalent TSS/Enh	Dnd41	blood
17	chr11:45685000-45686000	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr11:45685000-45686000	Active TSS	Brain Anterior Caudate	brain
19	chr11:45685000-45686000	Enhancers	NH-A	brain
20	chr11:45685200-45686000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr11:45685200-45686200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
22	chr11:45685200-45686600	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
23	chr11:45685200-45686600	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
24	chr11:45685400-45686000	Bivalent Enhancer	Adipose Nuclei	Adipose
25	chr11:45685400-45686000	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
26	chr11:45685400-45686000	Bivalent Enhancer	Duodenum Mucosa	Duodenum
27	chr11:45685400-45686000	Enhancers	Pancreas	Pancrea
28	chr11:45685400-45686000	Bivalent Enhancer	Osteobl	bone
29	chr11:45685400-45686200	Flanking Bivalent TSS/Enh	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:45685400-45686200	Bivalent Enhancer	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr11:45685400-45686200	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
32	chr11:45685400-45686200	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
33	chr11:45685400-45686200	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
34	chr11:45685400-45686200	Flanking Active TSS	Ovary	ovary
35	chr11:45685400-45686200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
36	chr11:45685400-45686400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
37	chr11:45685400-45686400	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
38	chr11:45685400-45686600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr11:45685400-45686600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
40	chr11:45685400-45686600	Flanking Active TSS	Gastric	stomach
41	chr11:45685400-45687000	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
42	chr11:45685600-45686000	Flanking Bivalent TSS/Enh	HUES64 Cell Line	embryonic stem cell
43	chr11:45685600-45686000	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
44	chr11:45685600-45686000	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
45	chr11:45685600-45686000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
46	chr11:45685600-45686000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr11:45685600-45686000	Flanking Bivalent TSS/Enh	Brain Substantia Nigra	brain
48	chr11:45685600-45686000	Enhancers	HSMM	muscle
49	chr11:45685600-45686200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
50	chr11:45685600-45686200	Flanking Bivalent TSS/Enh	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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