| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1002265 |
chr2:127029745-127733458 |
Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535919 |
chr2:127029745-127733458 |
Strong transcription Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv999422 |
chr2:127464647-127956543 |
Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1004930 |
chr2:127477369-127938234 |
Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv834365 |
chr2:127616996-127793863 |
Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv834366 |
chr2:127633714-127784692 |
Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1004166 |
chr2:127634679-127672143 |
Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
esv3352003 |
chr2:127635382-127638880 |
Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
esv3365887 |
chr2:127635582-127638880 |
Weak transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Enhancers Flanking Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
esv3426054 |
chr2:127635782-127638880 |
Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv979341 |
chr2:127636237-127648526 |
Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 12 |
esv3499768 |
chr2:127636906-127637477 |
Weak transcription Active TSS ZNF genes & repeats Enhancers Transcr. at gene 5' and 3'
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 13 |
esv3372543 |
chr2:127636935-127637435 |
ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers Weak transcription Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 14 |
esv3499769 |
chr2:127637069-127637459 |
Transcr. at gene 5' and 3' Active TSS Enhancers ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
