Variant report

Variant rs550510377
Chromosome Location chr19:55895865-55895866
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55894400-55897400 Active TSS HUES6 Cell Line embryonic stem cell
2 chr19:55894600-55896000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:55894600-55896800 Enhancers Fetal Heart heart
4 chr19:55894600-55898200 Active TSS H9 Cell Line embryonic stem cell
5 chr19:55894600-55898600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr19:55894800-55896000 Active TSS iPS-15b Cell Line embryonic stem cell
7 chr19:55894800-55896000 Active TSS iPS-18 Cell Line embryonic stem cell
8 chr19:55894800-55896000 Active TSS iPS-20b Cell Line embryonic stem cell
9 chr19:55894800-55896000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr19:55894800-55896200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
11 chr19:55894800-55897800 Active TSS ES-I3 Cell Line embryonic stem cell
12 chr19:55894800-55897800 Active TSS HUES64 Cell Line embryonic stem cell
13 chr19:55894800-55899000 Active TSS Small Intestine intestine
14 chr19:55894800-55899200 Active TSS Pancreatic Islets Pancreatic Islet
15 chr19:55894800-55899600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr19:55895000-55896000 Active TSS Brain Inferior Temporal Lobe brain
17 chr19:55895000-55896000 Active TSS Gastric stomach
18 chr19:55895000-55896000 Active TSS HSMMtube muscle
19 chr19:55895000-55896200 Active TSS Brain Anterior Caudate brain
20 chr19:55895000-55896200 Active TSS Duodenum Mucosa Duodenum
21 chr19:55895000-55896200 Active TSS K562 blood
22 chr19:55895000-55896400 Enhancers Placenta Placenta
23 chr19:55895000-55896600 Enhancers Placenta Amnion Placenta Amnion
24 chr19:55895000-55897800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
25 chr19:55895000-55898000 Active TSS Psoas Muscle Psoas
26 chr19:55895000-55898400 Active TSS Aorta Aorta
27 chr19:55895200-55898400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr19:55895400-55896000 Flanking Active TSS HUVEC blood vessel
29 chr19:55895400-55896400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr19:55895400-55896600 Flanking Active TSS HMEC breast
31 chr19:55895400-55896800 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr19:55895400-55896800 Flanking Active TSS Stomach Smooth Muscle stomach
33 chr19:55895400-55897000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
34 chr19:55895600-55896400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
35 chr19:55895600-55896400 Weak transcription Fetal Kidney kidney
36 chr19:55895600-55896400 Enhancers NHDF-Ad bronchial
37 chr19:55895600-55896600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
38 chr19:55895600-55896600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr19:55895600-55896600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr19:55895600-55896600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
41 chr19:55895600-55896600 Flanking Active TSS Adipose Nuclei Adipose
42 chr19:55895600-55896600 Flanking Active TSS Colonic Mucosa Colon
43 chr19:55895600-55896600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
44 chr19:55895600-55896600 Flanking Active TSS Esophagus oesophagus
45 chr19:55895600-55896600 Flanking Active TSS Left Ventricle heart
46 chr19:55895600-55896600 Flanking Active TSS Lung lung
47 chr19:55895600-55896600 Flanking Active TSS Right Ventricle heart
48 chr19:55895600-55896600 Flanking Active TSS NHLF lung
49 chr19:55895600-55896800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
50 chr19:55895600-55896800 Flanking Active TSS Primary T helper cells fromperipheralblood blood

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