The 2.0 version of rSNPBase

Variant report

Variant rs550546823
Chromosome Location chr17:66484627-66484628
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:66467800-66487000 Weak transcription Right Atrium heart
2 chr17:66478400-66487600 Weak transcription Gastric stomach
3 chr17:66480800-66490600 Enhancers Primary monocytes fromperipheralblood blood
4 chr17:66481400-66486000 Weak transcription Adipose Nuclei Adipose
5 chr17:66481400-66488200 Weak transcription Brain Hippocampus Middle brain
6 chr17:66481600-66487000 Weak transcription Brain Substantia Nigra brain
7 chr17:66481800-66486200 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr17:66482000-66487000 Weak transcription Placenta Placenta
9 chr17:66482400-66486200 Weak transcription Left Ventricle heart
10 chr17:66482400-66486400 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr17:66482400-66486400 Enhancers Monocytes-CD14+_RO01746 blood
12 chr17:66482400-66487000 Weak transcription Ovary ovary
13 chr17:66482600-66487800 Weak transcription Liver Liver
14 chr17:66482800-66485000 Enhancers Primary T killer naive cells fromperipheralblood blood
15 chr17:66483000-66487000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr17:66483400-66485000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr17:66483400-66485200 Enhancers Dnd41 blood
18 chr17:66483600-66484800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
19 chr17:66483600-66484800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
20 chr17:66483600-66485000 Enhancers Primary B cells from peripheral blood blood
21 chr17:66483600-66485000 Enhancers Primary T helper cells PMA-I stimulated --
22 chr17:66483600-66485000 Enhancers Primary Natural Killer cells fromperipheralblood blood
23 chr17:66483600-66485000 Enhancers Fetal Thymus thymus
24 chr17:66483600-66486400 Weak transcription Spleen Spleen
25 chr17:66483800-66485000 Enhancers Primary T cells fromperipheralblood blood
26 chr17:66484000-66484800 Enhancers Primary hematopoietic stem cells blood
27 chr17:66484200-66484800 Enhancers Duodenum Mucosa Duodenum
28 chr17:66484400-66485200 Enhancers Primary T helper cells fromperipheralblood blood
29 chr17:66484400-66487600 Weak transcription Esophagus oesophagus
30 chr17:66484600-66484800 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr17:66484600-66485000 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr17:66484600-66485000 Enhancers GM12878-XiMat blood
33 chr17:66484600-66485200 Enhancers Primary T cells from cord blood blood
34 chr17:66484600-66486200 Weak transcription Primary B cells from cord blood blood
35 chr17:66484600-66486200 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr17:66484600-66486200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr17:66484600-66486200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr17:66484600-66486800 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr17:66484600-66487600 Weak transcription HepG2 liver

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Last update: Aug 31, 2015