Variant report

Variant	rs550592209
Chromosome Location	chr7:50919311-50919312
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016665	chr7:50452552-51404524	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv606907	chr7:50899168-51195380	Enhancers Weak transcription Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	esv3442268	chr7:50918158-50922356	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:50911400-50925600	Weak transcription	Pancreas	Pancrea
2	chr7:50917400-50920800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:50918000-50920000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:50918600-50919800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr7:50918600-50919800	Enhancers	Muscle Satellite Cultured Cells	--
6	chr7:50918600-50919800	Enhancers	Osteobl	bone
7	chr7:50918600-50920200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr7:50918800-50919400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr7:50918800-50919600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr7:50918800-50920000	Enhancers	NH-A	brain
11	chr7:50919200-50919400	Enhancers	Right Ventricle	heart
12	chr7:50919200-50919800	Enhancers	A549	lung
13	chr7:50919200-50924200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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