Variant report

Variant rs550621593
Chromosome Location chr5:49736443-49736444
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:49735000-49738000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr5:49735200-49736600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
3 chr5:49735200-49737400 Active TSS HMEC breast
4 chr5:49735200-49738200 Active TSS Duodenum Mucosa Duodenum
5 chr5:49735400-49737600 Active TSS Primary T killer memory cells from peripheral blood blood
6 chr5:49735400-49737800 Active TSS Rectal Mucosa Donor 29 rectum
7 chr5:49735600-49736800 Flanking Active TSS Primary hematopoietic stem cells blood
8 chr5:49735600-49737200 Active TSS Primary T cells fromperipheralblood blood
9 chr5:49735600-49737800 Active TSS Thymus Thymus
10 chr5:49735800-49736600 Active TSS Adipose Nuclei Adipose
11 chr5:49735800-49736800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:49735800-49737000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
13 chr5:49735800-49737000 Active TSS GM12878-XiMat blood
14 chr5:49735800-49737400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
15 chr5:49735800-49737400 Active TSS Primary T regulatory cells fromperipheralblood blood
16 chr5:49735800-49737600 Active TSS iPS-18 Cell Line embryonic stem cell
17 chr5:49735800-49737600 Active TSS Primary T helper naive cells from peripheral blood blood
18 chr5:49735800-49737600 Active TSS Rectal Smooth Muscle rectum
19 chr5:49735800-49737800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr5:49735800-49737800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
21 chr5:49735800-49738000 Active TSS HUES6 Cell Line embryonic stem cell
22 chr5:49735800-49738000 Active TSS iPS-20b Cell Line embryonic stem cell
23 chr5:49736000-49736600 Active TSS Brain Hippocampus Middle brain
24 chr5:49736000-49736600 Active TSS Right Atrium heart
25 chr5:49736000-49736800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
26 chr5:49736000-49736800 Bivalent Enhancer Fetal Brain Male brain
27 chr5:49736000-49736800 Active TSS Sigmoid Colon Sigmoid Colon
28 chr5:49736000-49737200 Active TSS Primary T killer naive cells fromperipheralblood blood
29 chr5:49736000-49737200 Bivalent/Poised TSS Fetal Muscle Leg muscle
30 chr5:49736000-49737200 Active TSS Rectal Mucosa Donor 31 rectum
31 chr5:49736000-49737400 Active TSS Breast Myoepithelial Primary Cells Breast
32 chr5:49736000-49737400 Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr5:49736000-49737400 Active TSS Small Intestine intestine
34 chr5:49736000-49737400 Active TSS Stomach Mucosa stomach
35 chr5:49736000-49737400 Active TSS HSMM muscle
36 chr5:49736000-49737600 Active TSS HUES48 Cell Line embryonic stem cell
37 chr5:49736000-49737600 Active TSS HUES64 Cell Line embryonic stem cell
38 chr5:49736000-49737600 Active TSS Primary T helper memory cells from peripheral blood 1 blood
39 chr5:49736000-49737600 Active TSS Colonic Mucosa Colon
40 chr5:49736000-49737600 Active TSS Esophagus oesophagus
41 chr5:49736000-49737800 Active TSS H9 Cell Line embryonic stem cell
42 chr5:49736000-49737800 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr5:49736000-49737800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
44 chr5:49736000-49737800 Active TSS Fetal Intestine Small intestine
45 chr5:49736000-49737800 Active TSS Pancreatic Islets Pancreatic Islet
46 chr5:49736000-49738400 Active TSS ES-I3 Cell Line embryonic stem cell
47 chr5:49736200-49736600 Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr5:49736200-49736600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr5:49736200-49737200 Active TSS Primary monocytes fromperipheralblood blood
50 chr5:49736200-49737200 Active TSS Primary B cells from peripheral blood blood

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