The 2.0 version of rSNPBase

Variant report

Variant rs550630547
Chromosome Location chr10:97206393-97206394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr10:97190200-97207200 Weak transcription Colonic Mucosa Colon
3 chr10:97190800-97208200 Weak transcription H1 Cell Line embryonic stem cell
4 chr10:97193400-97210800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr10:97193800-97208000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:97197600-97207400 Weak transcription Brain Hippocampus Middle brain
7 chr10:97197600-97207600 Weak transcription Brain Germinal Matrix brain
8 chr10:97198400-97207600 Weak transcription Fetal Brain Female brain
9 chr10:97200200-97208800 Enhancers Colon Smooth Muscle Colon
10 chr10:97200800-97206800 Enhancers HepG2 liver
11 chr10:97201400-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr10:97201600-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr10:97202800-97209200 Enhancers Fetal Muscle Leg muscle
14 chr10:97203200-97208400 Enhancers Liver Liver
15 chr10:97203800-97209400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr10:97204000-97208600 Enhancers Left Ventricle heart
17 chr10:97204400-97206400 Enhancers Brain Angular Gyrus brain
18 chr10:97204600-97206400 Enhancers Brain Cingulate Gyrus brain
19 chr10:97204600-97208200 Enhancers Cortex derived primary cultured neurospheres brain
20 chr10:97204600-97208200 Enhancers Placenta Placenta
21 chr10:97204600-97208200 Enhancers Lung lung
22 chr10:97204600-97208600 Enhancers Adipose Nuclei Adipose
23 chr10:97204600-97208600 Enhancers Fetal Stomach stomach
24 chr10:97204600-97208800 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr10:97204800-97206600 Enhancers Ovary ovary
26 chr10:97204800-97206600 Enhancers Pancreas Pancrea
27 chr10:97204800-97206600 Enhancers Rectal Mucosa Donor 29 rectum
28 chr10:97204800-97207400 Enhancers Stomach Mucosa stomach
29 chr10:97204800-97208200 Enhancers Fetal Lung lung
30 chr10:97204800-97208600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr10:97204800-97209200 Enhancers Right Atrium heart
32 chr10:97204800-97209200 Enhancers Right Ventricle heart
33 chr10:97205000-97206600 Enhancers Small Intestine intestine
34 chr10:97205000-97208200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
35 chr10:97205200-97206400 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr10:97205200-97206600 Enhancers Fetal Intestine Small intestine
37 chr10:97205200-97211000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr10:97205400-97206600 Enhancers K562 blood
39 chr10:97205400-97206800 Weak transcription Fetal Kidney kidney
40 chr10:97205400-97206800 Weak transcription Fetal Muscle Trunk muscle
41 chr10:97205400-97208000 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr10:97205600-97206600 Weak transcription Psoas Muscle Psoas
43 chr10:97205600-97206600 Weak transcription Spleen Spleen
44 chr10:97205600-97207400 Weak transcription NHLF lung
45 chr10:97205600-97207800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr10:97205600-97208200 Enhancers HUVEC blood vessel
47 chr10:97205600-97209000 Enhancers Skeletal Muscle Female skeletal muscle
48 chr10:97205600-97210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr10:97205800-97206600 Enhancers Fetal Intestine Large intestine
50 chr10:97205800-97206600 Flanking Active TSS Stomach Smooth Muscle stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015