Variant report

Variant	rs550654732
Chromosome Location	chr13:39053710-39053711
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869125	chr13:38550449-39132813	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	esv1817566	chr13:39021562-39081413	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv1828009	chr13:39021562-39081413	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv561513	chr13:39022191-39060049	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv561514	chr13:39033242-39064286	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv1800401	chr13:39045401-39060049	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1803634	chr13:39045401-39060049	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1831414	chr13:39045401-39060049	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv561515	chr13:39052328-39059834	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv561516	chr13:39052328-39060049	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv561517	chr13:39052328-39064286	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv1842234	chr13:39052556-39059834	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv1834789	chr13:39052556-39060049	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv1797776	chr13:39052556-39075865	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:39046200-39061800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links