Variant report

Variant	rs550699529
Chromosome Location	chr3:133267177-133267178
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr3:133267146-133267267	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:133267011..133268726-chr3:133286807..133288849,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000201827	TF binding region
ENSG00000272832	TF binding region
ENSG00000250983	TF binding region

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3395931	chr3:133267163-133267310	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133260200-133268000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr3:133263400-133267400	Enhancers	Liver	Liver
3	chr3:133264000-133267200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr3:133264600-133267800	Enhancers	Placenta	Placenta
5	chr3:133265400-133267200	Enhancers	Stomach Smooth Muscle	stomach
6	chr3:133265400-133267400	Enhancers	Fetal Heart	heart
7	chr3:133265600-133267200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
8	chr3:133265600-133267200	Enhancers	Adipose Nuclei	Adipose
9	chr3:133265600-133267200	Enhancers	Fetal Stomach	stomach
10	chr3:133265600-133267400	Enhancers	Skeletal Muscle Female	skeletal muscle
11	chr3:133265600-133267400	Enhancers	A549	lung
12	chr3:133265600-133267400	Enhancers	NHLF	lung
13	chr3:133265600-133267600	Enhancers	NHDF-Ad	bronchial
14	chr3:133265600-133267800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr3:133265600-133268000	Enhancers	Muscle Satellite Cultured Cells	--
16	chr3:133265800-133267200	Enhancers	H9 Cell Line	embryonic stem cell
17	chr3:133265800-133267200	Enhancers	Colon Smooth Muscle	Colon
18	chr3:133265800-133267200	Enhancers	Fetal Muscle Leg	muscle
19	chr3:133265800-133267200	Enhancers	NH-A	brain
20	chr3:133265800-133267400	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr3:133265800-133267400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr3:133265800-133267400	Enhancers	Placenta Amnion	Placenta Amnion
23	chr3:133265800-133267400	Enhancers	Stomach Mucosa	stomach
24	chr3:133265800-133267600	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr3:133265800-133267600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr3:133266000-133267200	Enhancers	H1 Cell Line	embryonic stem cell
27	chr3:133266000-133267200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr3:133266000-133267200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr3:133266000-133267200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr3:133266000-133267200	Enhancers	Left Ventricle	heart
31	chr3:133266000-133267200	Enhancers	Pancreas	Pancrea
32	chr3:133266000-133267200	Enhancers	Sigmoid Colon	Sigmoid Colon
33	chr3:133266000-133267400	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr3:133266000-133267400	Enhancers	Rectal Mucosa Donor 31	rectum
35	chr3:133266200-133267200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr3:133266200-133267200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr3:133266200-133267200	Enhancers	Duodenum Smooth Muscle	Duodenum
38	chr3:133266200-133267200	Enhancers	NHEK	skin
39	chr3:133266200-133267400	Enhancers	ES-I3 Cell Line	embryonic stem cell
40	chr3:133266400-133267200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr3:133266400-133267200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr3:133266400-133267200	Enhancers	Fetal Thymus	thymus
43	chr3:133266400-133267200	Enhancers	Right Atrium	heart
44	chr3:133266400-133267400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr3:133266400-133267600	Enhancers	Rectal Mucosa Donor 29	rectum
46	chr3:133266600-133267200	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr3:133266600-133267200	Flanking Active TSS	Osteobl	bone
48	chr3:133266600-133267400	Enhancers	GM12878-XiMat	blood
49	chr3:133266600-133267800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr3:133266600-133269400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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