The 2.0 version of rSNPBase
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Variant report
Variant
rs550752372
Chromosome Location
chr11:34040682-34040683
allele
A/C
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:4)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:4 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr11:34039457..34041197-chr11:34043802..34046209,2
K562
blood:
2
chr11:34034770..34037468-chr11:34039227..34043308,3
K562
blood:
3
chr11:34035968..34037772-chr11:34038826..34040727,2
K562
blood:
4
chr11:34039994..34042109-chr11:34072195..34073736,2
K562
blood:
No data
No data
No data
Variant related genes
Relation type
ENSG00000135387
Chromatin interaction
Extended variants information (count: 2 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
esv3475930
chr11:34040624-34040687
Inactive region
Chromatin interactive region
1 gene(s)
inside rSNPs
diseases
2
esv3475941
chr11:34040624-34040687
Inactive region
Chromatin interactive region
1 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links