Variant report

Variant rs550947168
Chromosome Location chr1:155189233-155189234
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155179600-155195400 Weak transcription Aorta Aorta
2 chr1:155179600-155195800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:155179600-155196200 Weak transcription Pancreas Pancrea
4 chr1:155179600-155196600 Weak transcription Gastric stomach
5 chr1:155179600-155196600 Weak transcription Small Intestine intestine
6 chr1:155179800-155193800 Weak transcription HSMMtube muscle
7 chr1:155180000-155194000 Weak transcription HUVEC blood vessel
8 chr1:155180000-155195600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:155180200-155194000 Weak transcription HSMM muscle
10 chr1:155180600-155189600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:155180600-155195600 Weak transcription HepG2 liver
12 chr1:155182200-155195800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr1:155182200-155196400 Weak transcription Esophagus oesophagus
14 chr1:155182200-155196600 Weak transcription Lung lung
15 chr1:155182600-155196200 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:155182800-155194800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:155182800-155194800 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:155182800-155196400 Weak transcription Left Ventricle heart
19 chr1:155185800-155189400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:155186000-155195200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:155186600-155193000 Weak transcription A549 lung
22 chr1:155186800-155193600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:155186800-155193600 Weak transcription Fetal Muscle Leg muscle
24 chr1:155186800-155193600 Weak transcription Thymus Thymus
25 chr1:155187800-155190800 Enhancers Primary Natural Killer cells fromperipheralblood blood
26 chr1:155187800-155196000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:155188000-155189600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:155188000-155193800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:155188200-155189400 Flanking Active TSS Brain Cingulate Gyrus brain
30 chr1:155188200-155189600 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:155188200-155189800 Enhancers H1 Cell Line embryonic stem cell
32 chr1:155188400-155189600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:155188400-155191000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:155188600-155189400 Enhancers H9 Cell Line embryonic stem cell
35 chr1:155188600-155189400 Active TSS iPS-20b Cell Line embryonic stem cell
36 chr1:155188600-155189400 Enhancers Liver Liver
37 chr1:155188600-155189400 Active TSS Brain Anterior Caudate brain
38 chr1:155188600-155189600 Active TSS Fetal Kidney kidney
39 chr1:155188600-155189800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
40 chr1:155188600-155189800 Enhancers Placenta Placenta
41 chr1:155188600-155189800 Enhancers Dnd41 blood
42 chr1:155188600-155196600 Enhancers Primary monocytes fromperipheralblood blood
43 chr1:155188800-155189400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:155188800-155189400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:155188800-155189400 Flanking Active TSS Adipose Nuclei Adipose
46 chr1:155188800-155189400 Flanking Active TSS Colon Smooth Muscle Colon
47 chr1:155188800-155189400 Active TSS Fetal Brain Female brain
48 chr1:155188800-155189400 Enhancers Fetal Heart heart
49 chr1:155188800-155189400 Active TSS Ovary ovary
50 chr1:155188800-155189600 Enhancers Cortex derived primary cultured neurospheres brain

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