Variant report

Variant	rs551084537
Chromosome Location	chr1:85666744-85666745
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	E2F4	chr1:85666600-85666870	MCF10A-Er-Src	breast:	n/a	chr1:85666780-85666789
2	TBP	chr1:85666508-85667985	H1-hESC	embryonic stem cell:	n/a	chr1:85667404-85667415
3	POLR2A	chr1:85666105-85667772	GM15510	blood:	n/a	n/a
4	POLR2A	chr1:85666436-85667658	HUVEC	blood vessel:	n/a	n/a
5	CHD2	chr1:85666028-85667837	K562	blood:	n/a	n/a
6	EP300	chr1:85666506-85667007	K562	blood:	n/a	n/a
7	CREB1	chr1:85666564-85667071	A549	lung:	n/a	n/a
8	POLR2A	chr1:85666199-85667934	K562	blood:	n/a	n/a
9	POLR2A	chr1:85666513-85666979	HepG2	liver:	n/a	n/a
10	POLR2A	chr1:85666526-85667000	HepG2	liver:	n/a	n/a
11	RFX5	chr1:85666624-85667022	Hela-S3	cervix:	n/a	n/a
12	TAF1	chr1:85666592-85666932	PFSK-1	brain:	n/a	n/a
13	REST	chr1:85666517-85666971	K562	blood:	n/a	n/a
14	TCF3	chr1:85666184-85667306	GM12878	blood:	n/a	n/a
15	YY1	chr1:85666165-85667786	HepG2	liver:	n/a	chr1:85667352-85667361 chr1:85667364-85667378 chr1:85667561-85667575 chr1:85666800-85666809 chr1:85666979-85666993 chr1:85667361-85667375 chr1:85666771-85666785 chr1:85667358-85667367 chr1:85667364-85667373
16	HMGN3	chr1:85666087-85667819	K562	blood:	n/a	n/a
17	E2F6	chr1:85666188-85667934	K562	blood:	n/a	chr1:85666780-85666789 chr1:85667365-85667375 chr1:85667182-85667192
18	FOXP2	chr1:85666645-85666946	SK-N-MC	brain:	n/a	n/a
19	TBP	chr1:85666522-85667004	HepG2	liver:	n/a	n/a
20	RCOR1	chr1:85666322-85667817	K562	blood:	n/a	n/a
21	MAX	chr1:85665831-85667904	HepG2	liver:	n/a	chr1:85667440-85667449 chr1:85667107-85667122 chr1:85667564-85667574
22	TAF7	chr1:85666739-85667802	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr1:85666007-85667774	NB4	blood:	n/a	n/a
24	YY1	chr1:85666562-85667011	ECC-1	luminal epithelium:	n/a	chr1:85666800-85666809 chr1:85666979-85666993 chr1:85666771-85666785
25	TBP	chr1:85665737-85667942	K562	blood:	n/a	chr1:85667404-85667415
26	E2F6	chr1:85666148-85667863	K562	blood:	n/a	chr1:85666780-85666789 chr1:85667365-85667375 chr1:85667182-85667192
27	SIN3AK20	chr1:85665636-85667932	PANC-1	pancreas:	n/a	n/a
28	PML	chr1:85666520-85667424	GM12878	blood:	n/a	n/a
29	SP1	chr1:85666523-85666960	GM12878	blood:	n/a	chr1:85666801-85666813 chr1:85666749-85666758 chr1:85666802-85666816 chr1:85666776-85666790 chr1:85666780-85666789 chr1:85666801-85666813 chr1:85666748-85666762 chr1:85666803-85666812 chr1:85666747-85666759
30	TAF1	chr1:85666354-85667105	K562	blood:	n/a	n/a
31	MAX	chr1:85665919-85668042	H1-hESC	embryonic stem cell:	n/a	chr1:85667440-85667449 chr1:85667107-85667122 chr1:85667564-85667574
32	YY1	chr1:85666591-85666982	HCT-116	colon:	n/a	chr1:85666800-85666809 chr1:85666771-85666785
33	MAZ	chr1:85665873-85667882	K562	blood:	n/a	chr1:85667440-85667449 chr1:85667107-85667122 chr1:85667564-85667574
34	PML	chr1:85666438-85667856	MCF-7	breast:	n/a	n/a
35	ZBTB7A	chr1:85666130-85667868	ECC-1	luminal epithelium:	n/a	chr1:85667002-85667011
36	POLR2A	chr1:85666369-85667928	H1-hESC	embryonic stem cell:	n/a	n/a
37	E2F6	chr1:85666485-85666867	K562	blood:	n/a	chr1:85666780-85666789
38	CREB1	chr1:85666067-85667848	HepG2	liver:	n/a	n/a
39	ZBTB7A	chr1:85666483-85667759	K562	blood:	n/a	chr1:85667002-85667011
40	EGR1	chr1:85666440-85667687	ECC-1	luminal epithelium:	n/a	chr1:85667440-85667453 chr1:85667356-85667369 chr1:85666798-85666811 chr1:85667350-85667363 chr1:85666801-85666815 chr1:85667563-85667573 chr1:85666804-85666817 chr1:85667351-85667362 chr1:85666773-85666787 chr1:85667294-85667303 chr1:85666780-85666790 chr1:85666803-85666818 chr1:85667357-85667368 chr1:85666747-85666761 chr1:85667361-85667371
41	ETS1	chr1:85665978-85667563	K562	blood:	n/a	chr1:85666803-85666814 chr1:85666775-85666786 chr1:85667356-85667367 chr1:85667362-85667373 chr1:85667350-85667361 chr1:85666749-85666760
42	POLR2A	chr1:85666432-85667661	H1-neurons	neurons:	n/a	n/a
43	CREB1	chr1:85666551-85667296	GM12878	blood:	n/a	n/a
44	REST	chr1:85666715-85666995	A549	lung:	n/a	n/a
45	ZNF263	chr1:85666427-85667816	K562	blood:	n/a	chr1:85666759-85666768
46	POLR2A	chr1:85666587-85667752	HCT-116	colon:	n/a	n/a
47	POLR2A	chr1:85666465-85667770	K562	blood:	n/a	n/a
48	TAF1	chr1:85666565-85666966	MCF-7	breast:	n/a	n/a
49	E2F1	chr1:85666250-85667630	Hela-S3	cervix:	n/a	chr1:85666780-85666789 chr1:85666634-85666645 chr1:85667365-85667375 chr1:85667182-85667192
50	MAX	chr1:85666130-85668371	Hela-S3	cervix:	n/a	chr1:85667440-85667449 chr1:85668067-85668076 chr1:85667107-85667122 chr1:85667564-85667574

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:85666708-85666758	K562	blood:	n/a
2	chr1:85666720-85666770	NHBE	bronchial:	n/a
3	chr1:85666708-85666758	NH-A	brain:	n/a
4	chr1:85666708-85666758	HRPEpiC	eye:	n/a
5	chr1:85666741-85666791	HIPEpiC	eye:	n/a
6	chr1:85666708-85666758	NHBE	bronchial:	n/a
7	chr1:85666720-85666770	PrEC	prostate:	n/a
8	chr1:85666741-85666791	HUVEC	blood vessel:	n/a
9	chr1:85666720-85666770	AG09309	skin:	n/a
10	chr1:85666741-85666791	SKMC	muscle:	n/a
11	chr1:85666720-85666770	GM12891	blood:	n/a
12	chr1:85666741-85666791	HRPEpiC	eye:	n/a
13	chr1:85666708-85666758	HRCEpiC	kidney:	n/a
14	chr1:85666720-85666770	SK-N-SH	brain:	n/a
15	chr1:85666708-85666758	MCF10A-Er-Src	breast:	n/a
16	chr1:85666720-85666770	A549	lung:	n/a
17	chr1:85666708-85666758	HNPCEpiC	eye:	n/a
18	chr1:85666741-85666791	NB4	blood:	n/a
19	chr1:85666741-85666791	K562	blood:	n/a
20	chr1:85666720-85666770	HCPEpiC	choroid plexus:	n/a
21	chr1:85666708-85666758	HRE	kidney:	n/a
22	chr1:85666720-85666770	U87	brain:	n/a
23	chr1:85666708-85666758	GM12891	blood:	n/a
24	chr1:85666741-85666791	AG10803	skin:	n/a
25	chr1:85666741-85666791	GM12878	blood:	n/a
26	chr1:85666720-85666770	SK-N-SH_RA	brain:	n/a
27	chr1:85666708-85666758	AoSMC	blood vessel:	n/a
28	chr1:85666741-85666791	HCPEpiC	choroid plexus:	n/a
29	chr1:85666741-85666791	BJ	skin:	n/a
30	chr1:85666720-85666770	ovcar-3	ovarian:	n/a
31	chr1:85666720-85666770	SAEC	small airway:	n/a
32	chr1:85666708-85666758	HCT-116	colon:	n/a
33	chr1:85666741-85666791	PANC-1	pancreas:	n/a
34	chr1:85666720-85666770	HL-60	blood:	n/a
35	chr1:85666720-85666770	IMR90	lung:	fetal
36	chr1:85666720-85666770	AG04450	lung:	fetal
37	chr1:85666720-85666770	MCF-7	breast:	n/a
38	chr1:85666720-85666770	AG09319	gingival:	n/a
39	chr1:85666708-85666758	CMK	blood:	n/a
40	chr1:85666708-85666758	HL-60	blood:	n/a
41	chr1:85666720-85666770	T-47D	breast:	n/a
42	chr1:85666741-85666791	A549	lung:	n/a
43	chr1:85666720-85666770	NB4	blood:	n/a
44	chr1:85666741-85666791	HRCEpiC	kidney:	n/a
45	chr1:85666720-85666770	GM12892	blood:	n/a
46	chr1:85666720-85666770	HPAEpiC	pulmonary alveolar:	n/a
47	chr1:85666708-85666758	HUVEC	blood vessel:	n/a
48	chr1:85666708-85666758	Hepatocyte	liver:	n/a
49	chr1:85666720-85666770	HMEC	breast:	n/a
50	chr1:85666708-85666758	H1-hESC	embryonic stem cell:	embryo

No.	Distal block	Cell Line	Cell type
1	chr1:85664620..85668785-chr1:85722586..85726821,6	MCF-7	breast:
2	chr1:85665631..85669772-chr1:85739485..85744059,5	K562	blood:
3	chr1:85665831..85667640-chr1:86041122..86042846,2	MCF-7	breast:
4	chr1:85666179..85667836-chr1:85723614..85725791,2	K562	blood:
5	chr1:85665227..85667257-chr1:85740935..85743875,2	K562	blood:
6	chr1:85597874..85599552-chr1:85665218..85666801,2	MCF-7	breast:
7	chr1:85665913..85668656-chr1:85741362..85743092,3	MCF-7	breast:

Variant related genes	Relation type
SYDE2	TF binding region
SYDE2	CpG island
ENSG00000153904	Chromatin interaction
ENSG00000162642	Chromatin interaction
ENSG00000266110	Chromatin interaction
ENSG00000223653	Chromatin interaction
ENSG00000142867	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:46 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1006994	chr1:85454304-86327679	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	72 gene(s)	inside rSNPs	diseases
2	esv34165	chr1:85542040-85846249	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
3	nsv830459	chr1:85589585-85786311	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
4	esv1792086	chr1:85644478-85667608	Strong transcription Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
5	nsv546701	chr1:85662851-85667386	Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
6	nsv546702	chr1:85663699-85667356	Bivalent/Poised TSS Active TSS Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
7	esv1800754	chr1:85663699-85667557	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
8	esv1801195	chr1:85663699-85667608	Flanking Bivalent TSS/Enh Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
9	esv1811802	chr1:85663699-85667608	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
10	esv1812785	chr1:85663699-85667608	Enhancers Bivalent/Poised TSS Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
11	esv3324235	chr1:85665789-85668337	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
12	esv1836892	chr1:85666118-85667608	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
13	esv3325481	chr1:85666189-85668737	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
14	esv17132	chr1:85666191-85667696	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
15	nsv546703	chr1:85666270-85667130	Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
16	nsv546704	chr1:85666270-85667188	Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
17	nsv546705	chr1:85666270-85667246	Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
18	nsv546706	chr1:85666270-85667305	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
19	nsv546707	chr1:85666270-85667356	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
20	esv1835548	chr1:85666270-85667386	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
21	esv1800540	chr1:85666270-85667557	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
22	esv1806962	chr1:85666270-85667557	Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
23	esv1812840	chr1:85666270-85667557	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
24	esv1816636	chr1:85666270-85667557	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
25	esv1827813	chr1:85666270-85667557	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
26	esv1833642	chr1:85666270-85667557	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
27	esv1838789	chr1:85666270-85667557	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
28	nsv546708	chr1:85666270-85667557	Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
29	esv1793256	chr1:85666270-85667608	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
30	esv1812447	chr1:85666270-85667608	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
31	esv1815225	chr1:85666270-85667608	Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
32	esv1818170	chr1:85666270-85667608	Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
33	esv1826943	chr1:85666270-85667608	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
34	esv1838733	chr1:85666270-85667608	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
35	nsv546709	chr1:85666270-85667608	Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
36	nsv546710	chr1:85666374-85667188	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
37	nsv546711	chr1:85666374-85667305	Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
38	nsv546712	chr1:85666374-85667356	Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
39	nsv546713	chr1:85666374-85667386	Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
40	nsv546714	chr1:85666430-85667356	Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
41	nsv546715	chr1:85666430-85667557	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
42	nsv546716	chr1:85666533-85667305	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
43	nsv546717	chr1:85666533-85667356	Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
44	nsv546718	chr1:85666533-85667386	Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
45	nsv546719	chr1:85666625-85667356	Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases
46	nsv546720	chr1:85666731-85667386	Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85661000-85669000	Active TSS	Stomach Smooth Muscle	stomach
2	chr1:85661400-85668400	Active TSS	Colon Smooth Muscle	Colon
3	chr1:85663600-85668600	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr1:85663800-85667600	Active TSS	Rectal Mucosa Donor 29	rectum
5	chr1:85663800-85667800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr1:85663800-85667800	Active TSS	K562	blood
7	chr1:85663800-85668000	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr1:85663800-85668200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr1:85663800-85668200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
10	chr1:85663800-85668600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr1:85664000-85667800	Active TSS	HUES6 Cell Line	embryonic stem cell
12	chr1:85664000-85668200	Active TSS	Fetal Intestine Large	intestine
13	chr1:85664200-85667600	Active TSS	HMEC	breast
14	chr1:85664400-85668200	Active TSS	Fetal Kidney	kidney
15	chr1:85664600-85667200	Active TSS	Colonic Mucosa	Colon
16	chr1:85664600-85667800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr1:85664600-85667800	Active TSS	NHLF	lung
18	chr1:85664600-85668000	Active TSS	Fetal Intestine Small	intestine
19	chr1:85664600-85668400	Active TSS	H1 Cell Line	embryonic stem cell
20	chr1:85664600-85668400	Active TSS	Aorta	Aorta
21	chr1:85664800-85668200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr1:85664800-85668200	Active TSS	Breast Myoepithelial Primary Cells	Breast
23	chr1:85664800-85668200	Active TSS	A549	lung
24	chr1:85665000-85668000	Active TSS	HUES64 Cell Line	embryonic stem cell
25	chr1:85665000-85668000	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr1:85665200-85667600	Active TSS	NHEK	skin
27	chr1:85665200-85668000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
28	chr1:85665200-85668000	Active TSS	H9 Cell Line	embryonic stem cell
29	chr1:85665200-85668000	Active TSS	Ovary	ovary
30	chr1:85665200-85668000	Active TSS	GM12878-XiMat	blood
31	chr1:85665200-85668200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
32	chr1:85665200-85668600	Active TSS	ES-I3 Cell Line	embryonic stem cell
33	chr1:85665400-85667600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr1:85665400-85667600	Bivalent Enhancer	Fetal Brain Male	brain
35	chr1:85665400-85667800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr1:85665400-85667800	Bivalent/Poised TSS	HepG2	liver
37	chr1:85665400-85667800	Active TSS	HSMMtube	muscle
38	chr1:85665400-85668000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr1:85665400-85668000	Active TSS	Psoas Muscle	Psoas
40	chr1:85665400-85668000	Active TSS	Stomach Mucosa	stomach
41	chr1:85665400-85668000	Bivalent/Poised TSS	Thymus	Thymus
42	chr1:85665400-85668200	Active TSS	NHDF-Ad	bronchial
43	chr1:85665400-85668400	Active TSS	Left Ventricle	heart
44	chr1:85665600-85666800	Active TSS	Brain Hippocampus Middle	brain
45	chr1:85665600-85667000	Active TSS	Brain Substantia Nigra	brain
46	chr1:85665600-85667400	Active TSS	Brain Inferior Temporal Lobe	brain
47	chr1:85665600-85667600	Active TSS	Brain Angular Gyrus	brain
48	chr1:85665600-85667600	Active TSS	Brain Anterior Caudate	brain
49	chr1:85665600-85668000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr1:85665600-85668000	Bivalent/Poised TSS	Brain Cingulate Gyrus	brain

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