The 2.0 version of rSNPBase

Variant report

Variant rs551116427
Chromosome Location chr2:97784135-97784136
allele A/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:97779800-97788400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr2:97779800-97788400 Weak transcription Adipose Nuclei Adipose
3 chr2:97779800-97788400 Weak transcription Brain Substantia Nigra brain
4 chr2:97779800-97792000 Weak transcription Primary B cells from peripheral blood blood
5 chr2:97779800-97793200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr2:97779800-97802800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr2:97779800-97807600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr2:97779800-97807800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr2:97779800-97808600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr2:97779800-97809400 Weak transcription Fetal Thymus thymus
11 chr2:97779800-97809800 Weak transcription Fetal Intestine Large intestine
12 chr2:97779800-97810200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr2:97779800-97810400 Weak transcription Fetal Muscle Leg muscle
14 chr2:97779800-97810600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr2:97779800-97813000 Weak transcription NHEK skin
16 chr2:97779800-97813600 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr2:97779800-97814400 Weak transcription Placenta Amnion Placenta Amnion
18 chr2:97779800-97815800 Weak transcription NHDF-Ad bronchial
19 chr2:97779800-97819200 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr2:97779800-97821000 Weak transcription Primary B cells from cord blood blood
21 chr2:97779800-97825400 Weak transcription Hela-S3 cervix
22 chr2:97779800-97835200 Weak transcription Muscle Satellite Cultured Cells --
23 chr2:97779800-97835600 Weak transcription Fetal Lung lung
24 chr2:97779800-97845800 Weak transcription Primary T cells from cord blood blood
25 chr2:97779800-97845800 Weak transcription Duodenum Mucosa Duodenum
26 chr2:97779800-97845800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr2:97779800-97856800 Weak transcription Fetal Muscle Trunk muscle
28 chr2:97779800-97857000 Weak transcription HSMM muscle
29 chr2:97779800-97860400 Weak transcription HMEC breast
30 chr2:97779800-97877200 Weak transcription Rectal Smooth Muscle rectum
31 chr2:97780000-97788400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:97780000-97789400 Weak transcription Small Intestine intestine
33 chr2:97780000-97793200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr2:97780000-97793400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr2:97780000-97793800 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr2:97780000-97795000 Weak transcription Osteobl bone
37 chr2:97780000-97795600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr2:97780000-97796800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr2:97780000-97808600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr2:97780000-97810400 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:97780000-97810400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr2:97780000-97810800 Weak transcription A549 lung
43 chr2:97780000-97817600 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr2:97780000-97825800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:97780000-97884600 Weak transcription Fetal Stomach stomach
46 chr2:97780200-97799600 Weak transcription Thymus Thymus
47 chr2:97780200-97804200 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr2:97780200-97807600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr2:97780200-97811200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:97780800-97793200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015