The 2.0 version of rSNPBase

Variant report

Variant rs551158076
Chromosome Location chr6:150731143-150731144
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:150725400-150733000 Weak transcription Stomach Mucosa stomach
2 chr6:150725600-150731200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr6:150727600-150734000 Enhancers Osteobl bone
4 chr6:150728400-150732400 Enhancers Fetal Lung lung
5 chr6:150728800-150732000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr6:150729600-150731200 Enhancers Esophagus oesophagus
7 chr6:150729800-150732200 Enhancers Liver Liver
8 chr6:150730000-150731200 Enhancers Gastric stomach
9 chr6:150730000-150731400 Enhancers Duodenum Mucosa Duodenum
10 chr6:150730000-150731400 Enhancers Left Ventricle heart
11 chr6:150730000-150731400 Enhancers Pancreas Pancrea
12 chr6:150730000-150731400 Enhancers HMEC breast
13 chr6:150730000-150732200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:150730200-150731400 Enhancers Fetal Muscle Trunk muscle
15 chr6:150730200-150731400 Enhancers Fetal Muscle Leg muscle
16 chr6:150730200-150731800 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr6:150730200-150732800 Enhancers Fetal Heart heart
18 chr6:150730200-150732800 Enhancers Fetal Kidney kidney
19 chr6:150730400-150731200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:150730400-150731200 Enhancers Rectal Mucosa Donor 31 rectum
21 chr6:150730400-150731200 Enhancers Stomach Smooth Muscle stomach
22 chr6:150730400-150731200 Enhancers Spleen Spleen
23 chr6:150730400-150731400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr6:150730400-150731400 Enhancers Primary B cells from cord blood blood
25 chr6:150730400-150731400 Enhancers Right Atrium heart
26 chr6:150730400-150732000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr6:150730400-150732000 Enhancers Adipose Nuclei Adipose
28 chr6:150730400-150732200 Enhancers Skeletal Muscle Female skeletal muscle
29 chr6:150730400-150732400 Enhancers Fetal Stomach stomach
30 chr6:150730400-150733000 Enhancers HSMMtube muscle
31 chr6:150730600-150731200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr6:150730600-150731200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:150730600-150731400 Enhancers Primary hematopoietic stem cells blood
34 chr6:150730600-150731400 Enhancers Skeletal Muscle Male skeletal muscle
35 chr6:150730600-150731400 Enhancers Small Intestine intestine
36 chr6:150730600-150731800 Enhancers Duodenum Smooth Muscle Duodenum
37 chr6:150730600-150732400 Enhancers Breast Myoepithelial Primary Cells Breast
38 chr6:150730600-150732600 Enhancers Colon Smooth Muscle Colon
39 chr6:150730600-150733600 Enhancers NH-A brain
40 chr6:150730800-150731200 Enhancers Primary monocytes fromperipheralblood blood
41 chr6:150730800-150731200 Enhancers Rectal Mucosa Donor 29 rectum
42 chr6:150730800-150731400 Enhancers Primary B cells from peripheral blood blood
43 chr6:150730800-150731400 Enhancers Fetal Intestine Large intestine
44 chr6:150730800-150731400 Enhancers Psoas Muscle Psoas
45 chr6:150730800-150731800 Enhancers Cortex derived primary cultured neurospheres brain
46 chr6:150730800-150731800 Enhancers Brain Germinal Matrix brain
47 chr6:150730800-150732600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr6:150731000-150731200 Enhancers Right Ventricle heart
49 chr6:150731000-150731200 Flanking Active TSS Sigmoid Colon Sigmoid Colon
50 chr6:150731000-150731400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015