Variant report

Variant rs551199101
Chromosome Location chr5:59991338-59991339
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59969600-59994800 Weak transcription Fetal Lung lung
2 chr5:59971000-59993800 Weak transcription NHLF lung
3 chr5:59971000-59994000 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr5:59971000-59994200 Weak transcription NH-A brain
5 chr5:59974200-59994200 Weak transcription Duodenum Mucosa Duodenum
6 chr5:59974400-59993600 Weak transcription Hela-S3 cervix
7 chr5:59977200-59994800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr5:59980200-59995200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr5:59981800-59994200 Weak transcription Muscle Satellite Cultured Cells --
10 chr5:59982400-59993600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr5:59982600-59994800 Weak transcription Fetal Muscle Leg muscle
12 chr5:59982800-59992400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr5:59982800-59993800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr5:59982800-59994800 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr5:59982800-59994800 Weak transcription Primary hematopoietic stem cells blood
16 chr5:59983000-59992800 Weak transcription NHEK skin
17 chr5:59983000-59994000 Weak transcription H9 Cell Line embryonic stem cell
18 chr5:59983000-59994000 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr5:59983000-59994000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr5:59983000-59994200 Weak transcription Thymus Thymus
21 chr5:59983000-59994600 Weak transcription H1 Cell Line embryonic stem cell
22 chr5:59983000-59994800 Weak transcription Fetal Thymus thymus
23 chr5:59983000-59994800 Weak transcription HSMM muscle
24 chr5:59983200-59993800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr5:59983200-59993800 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr5:59984200-59993000 Weak transcription NHDF-Ad bronchial
27 chr5:59984600-59993000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr5:59984600-59994000 Weak transcription Fetal Heart heart
29 chr5:59984600-59994800 Weak transcription Fetal Intestine Small intestine
30 chr5:59986800-59992400 Weak transcription HepG2 liver
31 chr5:59986800-59994000 Weak transcription Osteobl bone
32 chr5:59990000-59991400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr5:59990200-59991600 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr5:59990600-59991600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
35 chr5:59990800-59991600 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr5:59990800-59991600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:59991000-59991400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
38 chr5:59991000-59991400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr5:59991000-59991400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr5:59991000-59991400 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
41 chr5:59991000-59991400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr5:59991000-59991400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
43 chr5:59991000-59991400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
44 chr5:59991000-59991400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr5:59991000-59991400 ZNF genes & repeats GM12878-XiMat blood
46 chr5:59991000-59991400 Strong transcription K562 blood
47 chr5:59991000-59991600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr5:59991200-59991400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
49 chr5:59991200-59991400 Genic enhancers Placenta Placenta
50 chr5:59991200-59991400 Enhancers Pancreas Pancrea

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