Variant report

Variant rs551294415
Chromosome Location chr21:47572802-47572803
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47562600-47580600 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr21:47564000-47573000 Weak transcription Brain Anterior Caudate brain
3 chr21:47564000-47573000 Weak transcription Stomach Mucosa stomach
4 chr21:47564200-47573000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr21:47564200-47573000 Weak transcription Fetal Lung lung
6 chr21:47564800-47575200 Weak transcription H9 Cell Line embryonic stem cell
7 chr21:47567400-47573000 Weak transcription Duodenum Mucosa Duodenum
8 chr21:47567400-47573600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr21:47570400-47573200 Weak transcription Brain Substantia Nigra brain
10 chr21:47570800-47573000 Weak transcription Brain Inferior Temporal Lobe brain
11 chr21:47570800-47573000 Enhancers Fetal Muscle Trunk muscle
12 chr21:47571000-47573000 Weak transcription Brain Cingulate Gyrus brain
13 chr21:47571000-47574600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr21:47571200-47574200 Enhancers H1 Cell Line embryonic stem cell
15 chr21:47571400-47573000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr21:47572000-47573800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
17 chr21:47572200-47573000 Bivalent Enhancer Fetal Stomach stomach
18 chr21:47572200-47573000 Enhancers Rectal Mucosa Donor 31 rectum
19 chr21:47572200-47573800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr21:47572200-47573800 Enhancers HSMMtube muscle
21 chr21:47572200-47574000 Enhancers Fetal Muscle Leg muscle
22 chr21:47572200-47574200 Enhancers Fetal Heart heart
23 chr21:47572400-47573400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
24 chr21:47572600-47573000 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr21:47572600-47573000 Enhancers Muscle Satellite Cultured Cells --
26 chr21:47572600-47573000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
27 chr21:47572600-47573000 Bivalent Enhancer NHEK skin
28 chr21:47572600-47573400 Enhancers Pancreas Pancrea
29 chr21:47572600-47573600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr21:47572600-47573600 Enhancers Spleen Spleen
31 chr21:47572600-47573800 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
32 chr21:47572600-47574000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr21:47572600-47574000 Enhancers Placenta Placenta
34 chr21:47572800-47573000 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
35 chr21:47572800-47573000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr21:47572800-47573000 Bivalent Enhancer Colonic Mucosa Colon
37 chr21:47572800-47573000 Enhancers Duodenum Smooth Muscle Duodenum
38 chr21:47572800-47573000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr21:47572800-47573000 Bivalent Enhancer Stomach Smooth Muscle stomach
40 chr21:47572800-47573000 Transcr. at gene 5' and 3' HepG2 liver
41 chr21:47572800-47573000 Active TSS Osteobl bone
42 chr21:47572800-47573200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr21:47572800-47573200 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr21:47572800-47573200 Flanking Active TSS Fetal Intestine Large intestine
45 chr21:47572800-47573200 Flanking Active TSS Ovary ovary
46 chr21:47572800-47573200 Enhancers Right Atrium heart
47 chr21:47572800-47573400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr21:47572800-47573400 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr21:47572800-47573400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
50 chr21:47572800-47573400 Active TSS Hela-S3 cervix

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