| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv917332 |
chr5:26620698-27232713 |
Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
10 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv868856 |
chr5:26789778-27321390 |
Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv881006 |
chr5:27010686-27231314 |
Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv3450425 |
chr5:27134073-27323407 |
ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv881286 |
chr5:27135351-27770554 |
Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1025795 |
chr5:27143283-27199590 |
Enhancers ZNF genes & repeats Active TSS Weak transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
nsv1017638 |
chr5:27143283-27206186 |
Weak transcription Enhancers Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015