Variant report

Variant	rs551373497
Chromosome Location	chr8:61567076-61567077
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr8:61566856-61567235	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:61562515..61568989-chr8:61586860..61594946,37	MCF-7	breast:
2	chr8:61559343..61568621-chr8:61588061..61597189,35	MCF-7	breast:
3	chr8:61563005..61568398-chr8:61588453..61593214,14	K562	blood:
4	chr8:61562433..61567496-chr8:61571905..61575539,5	K562	blood:
5	chr8:61562616..61568326-chr8:61569044..61575643,11	MCF-7	breast:
6	chr8:61563620..61565259-chr8:61566551..61570060,3	K562	blood:
7	chr8:61562679..61568216-chr8:61588453..61593754,19	K562	blood:

No data

Variant related genes	Relation type
ENSG00000254869	TF binding region
ENSG00000255289	Chromatin interaction
ENSG00000171316	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917756	chr8:60942299-61862796	Enhancers Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
2	nsv530383	chr8:61431756-61605551	Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
3	nsv831335	chr8:61497540-61688992	Weak transcription Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
4	nsv890945	chr8:61522008-61707725	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
5	nsv824657	chr8:61555227-61626758	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
6	nsv824658	chr8:61561488-61612108	Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
7	nsv525495	chr8:61566655-61568210	Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:61563400-61567200	Active TSS	Pancreatic Islets	Pancreatic Islet
2	chr8:61566800-61567200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:61566800-61567200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr8:61566800-61567200	Enhancers	Primary B cells from peripheral blood	blood
5	chr8:61566800-61567200	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:61566800-61567200	Enhancers	Brain Anterior Caudate	brain
7	chr8:61566800-61567200	Bivalent Enhancer	Fetal Lung	lung
8	chr8:61566800-61567400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
9	chr8:61567000-61567200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
10	chr8:61567000-61567200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
11	chr8:61567000-61567200	Enhancers	Primary B cells from cord blood	blood
12	chr8:61567000-61567200	Bivalent Enhancer	Primary T cells from cord blood	blood
13	chr8:61567000-61567200	Enhancers	Primary T helper cells fromperipheralblood	blood
14	chr8:61567000-61567200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr8:61567000-61567200	Bivalent Enhancer	Fetal Kidney	kidney
16	chr8:61567000-61567200	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr8:61567000-61567200	Enhancers	GM12878-XiMat	blood
18	chr8:61567000-61567200	Enhancers	HMEC	breast
19	chr8:61567000-61567200	Enhancers	NHEK	skin
20	chr8:61567000-61567400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
21	chr8:61567000-61567400	Enhancers	Hela-S3	cervix

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