Variant report

Variant rs551446195
Chromosome Location chr13:30072048-30072049
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30047200-30081000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr13:30062400-30087200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr13:30065000-30077200 Weak transcription Fetal Brain Female brain
4 chr13:30066400-30084400 Weak transcription H9 Cell Line embryonic stem cell
5 chr13:30068200-30072600 Weak transcription Aorta Aorta
6 chr13:30069600-30072400 Enhancers Fetal Heart heart
7 chr13:30070200-30072200 Enhancers Fetal Muscle Trunk muscle
8 chr13:30070200-30072800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
9 chr13:30070200-30072800 Enhancers Ovary ovary
10 chr13:30070200-30072800 Enhancers Placenta Amnion Placenta Amnion
11 chr13:30070200-30073200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr13:30070200-30075600 Enhancers Fetal Stomach stomach
13 chr13:30070400-30073000 Enhancers HSMMtube muscle
14 chr13:30070600-30072400 Enhancers Primary hematopoietic stem cells short term culture blood
15 chr13:30070600-30072600 Enhancers Fetal Muscle Leg muscle
16 chr13:30070600-30077200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr13:30070600-30077200 Weak transcription Brain Anterior Caudate brain
18 chr13:30070800-30072200 Active TSS Pancreas Pancrea
19 chr13:30070800-30073400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr13:30070800-30075400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr13:30071000-30072400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr13:30071000-30072600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr13:30071000-30073000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr13:30071000-30074000 Weak transcription Gastric stomach
25 chr13:30071000-30075600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr13:30071000-30128800 Strong transcription Dnd41 blood
27 chr13:30071200-30076000 Weak transcription Fetal Brain Male brain
28 chr13:30071600-30072400 Weak transcription Stomach Smooth Muscle stomach
29 chr13:30071600-30074000 Weak transcription Spleen Spleen
30 chr13:30071600-30075600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr13:30071600-30075600 Weak transcription Right Ventricle heart
32 chr13:30071600-30076800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr13:30071600-30077000 Weak transcription Brain Germinal Matrix brain
34 chr13:30071800-30072400 Enhancers HSMM muscle
35 chr13:30071800-30073600 Weak transcription Fetal Lung lung
36 chr13:30071800-30074600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr13:30072000-30074200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr13:30072000-30075200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr13:30072000-30078400 Strong transcription Left Ventricle heart
40 chr13:30072000-30080400 Weak transcription Cortex derived primary cultured neurospheres brain

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