Variant report

Variant	rs551713349
Chromosome Location	chr14:32605839-32605840
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:32543954..32548342-chr14:32602314..32606365,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000258655	Chromatin interaction
ENSG00000100852	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832764	chr14:32564468-32723213	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	nsv983949	chr14:32604484-32618641	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:96 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32571800-32606800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr14:32571800-32614400	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr14:32574400-32615600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr14:32577400-32625000	Weak transcription	Small Intestine	intestine
5	chr14:32590000-32623000	Weak transcription	HSMMtube	muscle
6	chr14:32591600-32621200	Weak transcription	NHLF	lung
7	chr14:32592200-32606400	Weak transcription	Brain Substantia Nigra	brain
8	chr14:32592800-32614400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr14:32593600-32606400	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr14:32593800-32607200	Weak transcription	Monocytes-CD14+_RO01746	blood
11	chr14:32596000-32606600	Weak transcription	Brain Angular Gyrus	brain
12	chr14:32596000-32622800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
13	chr14:32596400-32620400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr14:32596600-32616200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr14:32597600-32606400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr14:32597800-32607200	Weak transcription	Ovary	ovary
17	chr14:32597800-32607400	Weak transcription	Lung	lung
18	chr14:32597800-32616600	Weak transcription	Sigmoid Colon	Sigmoid Colon
19	chr14:32597800-32619600	Weak transcription	Esophagus	oesophagus
20	chr14:32598000-32606800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr14:32598000-32606800	Weak transcription	Fetal Thymus	thymus
22	chr14:32598000-32614200	Weak transcription	Pancreas	Pancrea
23	chr14:32598000-32618400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr14:32598000-32629000	Weak transcription	Gastric	stomach
25	chr14:32599000-32606400	Weak transcription	Duodenum Smooth Muscle	Duodenum
26	chr14:32599000-32607400	Weak transcription	Brain Anterior Caudate	brain
27	chr14:32599200-32606400	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr14:32599200-32606800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr14:32599200-32615200	Weak transcription	Stomach Smooth Muscle	stomach
30	chr14:32599200-32619600	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr14:32599200-32623400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr14:32600200-32606800	Weak transcription	Fetal Stomach	stomach
33	chr14:32600400-32611600	Weak transcription	Placenta	Placenta
34	chr14:32600400-32623000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr14:32600800-32615600	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr14:32601600-32626800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
37	chr14:32602200-32619600	Weak transcription	K562	blood
38	chr14:32603200-32606400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr14:32603200-32607400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr14:32603200-32608800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr14:32603600-32608200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr14:32603600-32630400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr14:32603800-32615600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr14:32604000-32607400	Weak transcription	Brain Cingulate Gyrus	brain
45	chr14:32604000-32626200	Weak transcription	Rectal Smooth Muscle	rectum
46	chr14:32604200-32606600	Weak transcription	Osteobl	bone
47	chr14:32604200-32606800	Weak transcription	Fetal Intestine Large	intestine
48	chr14:32604200-32614400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr14:32604400-32606400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr14:32604400-32606800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell

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