Variant report

Variant rs551731502
Chromosome Location chr5:106738068-106738069
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:106720400-106740800 Weak transcription Aorta Aorta
2 chr5:106725800-106740400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr5:106728400-106738200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr5:106731600-106738200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr5:106732200-106738200 Weak transcription HSMM muscle
6 chr5:106732200-106739400 Weak transcription GM12878-XiMat blood
7 chr5:106732200-106753200 Weak transcription Fetal Kidney kidney
8 chr5:106733000-106738200 Weak transcription Ovary ovary
9 chr5:106733000-106738400 Weak transcription Left Ventricle heart
10 chr5:106733600-106744800 Weak transcription Right Ventricle heart
11 chr5:106734400-106738200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:106735200-106741200 Enhancers iPS-15b Cell Line embryonic stem cell
13 chr5:106735200-106741400 Enhancers HUES64 Cell Line embryonic stem cell
14 chr5:106736000-106740000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr5:106736000-106740000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr5:106736200-106742200 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr5:106736400-106740200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:106736400-106741200 Enhancers A549 lung
19 chr5:106736600-106740600 Enhancers Cortex derived primary cultured neurospheres brain
20 chr5:106736800-106738800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr5:106736800-106740000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
22 chr5:106736800-106740200 Enhancers HUES6 Cell Line embryonic stem cell
23 chr5:106737200-106739600 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:106737200-106740000 Enhancers Brain Germinal Matrix brain
25 chr5:106737400-106738400 Weak transcription Brain Hippocampus Middle brain
26 chr5:106737400-106738600 Enhancers Fetal Brain Female brain
27 chr5:106737400-106738800 Enhancers Fetal Muscle Leg muscle
28 chr5:106737400-106739200 Enhancers Fetal Brain Male brain
29 chr5:106737400-106739600 Enhancers Brain Anterior Caudate brain
30 chr5:106737400-106740400 Enhancers HMEC breast
31 chr5:106737400-106741400 Enhancers Fetal Heart heart
32 chr5:106737600-106738600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr5:106737600-106738800 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
34 chr5:106737600-106738800 Enhancers Fetal Stomach stomach
35 chr5:106737600-106739200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr5:106737600-106740800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr5:106737800-106738400 Weak transcription Fetal Lung lung
38 chr5:106737800-106738600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr5:106737800-106739000 Enhancers H1 Cell Line embryonic stem cell
40 chr5:106737800-106739000 Enhancers Placenta Amnion Placenta Amnion
41 chr5:106737800-106739600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr5:106738000-106738400 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
43 chr5:106738000-106738600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:106738000-106738800 Active TSS Pancreatic Islets Pancreatic Islet
45 chr5:106738000-106740200 Enhancers HUES48 Cell Line embryonic stem cell

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