Variant report

Variant rs551768374
Chromosome Location chr3:50193025-50193026
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50191600-50193200 Bivalent/Poised TSS Primary T cells from cord blood blood
2 chr3:50191600-50193400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
3 chr3:50191800-50193200 Active TSS Rectal Smooth Muscle rectum
4 chr3:50191800-50193400 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:50191800-50193400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
6 chr3:50191800-50193400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
7 chr3:50191800-50193400 Active TSS Fetal Brain Female brain
8 chr3:50191800-50193400 Active TSS Hela-S3 cervix
9 chr3:50191800-50194400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr3:50192000-50193200 Bivalent/Poised TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr3:50192000-50193200 Active TSS iPS-15b Cell Line embryonic stem cell
12 chr3:50192000-50193200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
13 chr3:50192000-50193200 Bivalent/Poised TSS Brain Cingulate Gyrus brain
14 chr3:50192000-50193200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
15 chr3:50192000-50193200 Weak transcription Fetal Brain Male brain
16 chr3:50192000-50193200 Active TSS Rectal Mucosa Donor 31 rectum
17 chr3:50192000-50193200 Active TSS A549 lung
18 chr3:50192000-50193200 Bivalent/Poised TSS HSMM muscle
19 chr3:50192000-50193400 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
20 chr3:50192000-50193400 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr3:50192000-50193400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
22 chr3:50192000-50193400 Active TSS K562 blood
23 chr3:50192000-50193600 Active TSS Aorta Aorta
24 chr3:50192000-50193600 Active TSS Small Intestine intestine
25 chr3:50192000-50193800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
26 chr3:50192000-50194400 Active TSS Pancreatic Islets Pancreatic Islet
27 chr3:50192000-50194400 Active TSS Psoas Muscle Psoas
28 chr3:50192000-50194800 Active TSS H9 Cell Line embryonic stem cell
29 chr3:50192000-50194800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:50192000-50194800 Active TSS Gastric stomach
31 chr3:50192000-50194800 Active TSS Left Ventricle heart
32 chr3:50192000-50194800 Active TSS Right Atrium heart
33 chr3:50192200-50193200 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:50192200-50193200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr3:50192200-50193200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr3:50192200-50193200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
37 chr3:50192200-50193200 Active TSS Breast Myoepithelial Primary Cells Breast
38 chr3:50192200-50193200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
39 chr3:50192200-50193200 Active TSS Esophagus oesophagus
40 chr3:50192200-50193200 Active TSS Sigmoid Colon Sigmoid Colon
41 chr3:50192200-50193200 Active TSS Skeletal Muscle Male skeletal muscle
42 chr3:50192200-50193200 Active TSS HepG2 liver
43 chr3:50192200-50193200 Active TSS HUVEC blood vessel
44 chr3:50192200-50193200 Active TSS Osteobl bone
45 chr3:50192200-50193600 Active TSS NHLF lung
46 chr3:50192200-50193800 Active TSS Ovary ovary
47 chr3:50192200-50194000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr3:50192200-50194400 Active TSS HMEC breast
49 chr3:50192200-50195000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr3:50192400-50194400 Active TSS NHEK skin

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