The 2.0 version of rSNPBase

Variant report

Variant rs551770402
Chromosome Location chr9:100131294-100131295
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100070000-100131400 Weak transcription Fetal Kidney kidney
2 chr9:100077000-100140800 Weak transcription Fetal Brain Male brain
3 chr9:100086600-100132000 Weak transcription Thymus Thymus
4 chr9:100088600-100132800 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr9:100090600-100133800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr9:100091600-100149200 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr9:100099000-100132200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr9:100104400-100142000 Weak transcription Rectal Smooth Muscle rectum
9 chr9:100106800-100143200 Weak transcription Liver Liver
10 chr9:100107000-100131400 Weak transcription Primary hematopoietic stem cells blood
11 chr9:100107200-100138400 Weak transcription Placenta Amnion Placenta Amnion
12 chr9:100108000-100148200 Weak transcription Esophagus oesophagus
13 chr9:100110200-100132200 Weak transcription Primary T cells fromperipheralblood blood
14 chr9:100115400-100144600 Weak transcription Hela-S3 cervix
15 chr9:100115600-100139200 Weak transcription H9 Cell Line embryonic stem cell
16 chr9:100117400-100132400 Weak transcription Fetal Intestine Large intestine
17 chr9:100117400-100145000 Weak transcription Colon Smooth Muscle Colon
18 chr9:100117600-100146400 Weak transcription Small Intestine intestine
19 chr9:100118200-100132400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr9:100118200-100141600 Weak transcription Primary T cells from cord blood blood
21 chr9:100120000-100137800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr9:100121800-100137800 Weak transcription Gastric stomach
23 chr9:100125400-100132200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr9:100126400-100131400 Weak transcription H1 Cell Line embryonic stem cell
25 chr9:100126400-100137800 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr9:100126600-100141600 Weak transcription Primary B cells from peripheral blood blood
27 chr9:100126600-100148400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr9:100127000-100148600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr9:100128800-100132600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr9:100129000-100131400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr9:100129000-100131400 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr9:100129000-100131800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr9:100129000-100132000 Weak transcription Ovary ovary
34 chr9:100129000-100132000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr9:100129000-100132200 Weak transcription Lung lung
36 chr9:100129000-100132400 Weak transcription Brain Angular Gyrus brain
37 chr9:100129000-100132400 Weak transcription Brain Cingulate Gyrus brain
38 chr9:100129000-100134800 Weak transcription Spleen Spleen
39 chr9:100129000-100137200 Weak transcription Aorta Aorta
40 chr9:100129000-100137800 Weak transcription Pancreas Pancrea
41 chr9:100129000-100138200 Weak transcription Brain Substantia Nigra brain
42 chr9:100129000-100144400 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr9:100129200-100131400 Weak transcription Brain Anterior Caudate brain
44 chr9:100129200-100131400 Weak transcription Duodenum Mucosa Duodenum
45 chr9:100129200-100131600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr9:100129200-100131800 Weak transcription Fetal Intestine Small intestine
47 chr9:100129200-100132000 Weak transcription Brain Inferior Temporal Lobe brain
48 chr9:100129200-100132200 Weak transcription Stomach Smooth Muscle stomach
49 chr9:100129200-100132400 Weak transcription Right Ventricle heart
50 chr9:100129200-100132400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015