Variant report

Variant	rs551776400
Chromosome Location	chr12:68382379-68382380
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3411149	chr12:68066948-68435533	Enhancers Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	nsv1039638	chr12:68293351-68399871	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
3	nsv975510	chr12:68382193-68385232	Enhancers Active TSS Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv975509	chr12:68382193-68405026	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:68381000-68382800	Enhancers	Primary B cells from peripheral blood	blood
2	chr12:68381400-68382800	Enhancers	Primary B cells from cord blood	blood
3	chr12:68381400-68383800	Enhancers	Primary hematopoietic stem cells	blood
4	chr12:68381800-68382600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
5	chr12:68381800-68383200	Enhancers	Primary T helper cells fromperipheralblood	blood
6	chr12:68381800-68383200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr12:68382000-68382600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr12:68382000-68382600	Enhancers	Small Intestine	intestine
9	chr12:68382000-68382800	Enhancers	Primary T cells from cord blood	blood
10	chr12:68382000-68383200	Enhancers	Primary T helper cells PMA-I stimulated	--
11	chr12:68382200-68382400	Enhancers	Duodenum Mucosa	Duodenum
12	chr12:68382200-68382800	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr12:68382200-68383000	Enhancers	Primary T helper naive cells from peripheral blood	blood
14	chr12:68382200-68383200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr12:68382200-68383200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
16	chr12:68382200-68383400	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr12:68382200-68383400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr12:68382200-68384400	Flanking Active TSS	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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