The 2.0 version of rSNPBase

Variant report

Variant rs551842756
Chromosome Location chr3:179385115-179385116
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179372600-179403200 Weak transcription Primary B cells from cord blood blood
2 chr3:179372600-179408400 Weak transcription Fetal Intestine Small intestine
3 chr3:179372600-179425200 Weak transcription Primary hematopoietic stem cells blood
4 chr3:179374600-179408000 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr3:179375000-179389200 Weak transcription Hela-S3 cervix
6 chr3:179376600-179400800 Weak transcription Dnd41 blood
7 chr3:179379200-179385200 Enhancers Fetal Heart heart
8 chr3:179380600-179418800 Weak transcription Primary T cells fromperipheralblood blood
9 chr3:179382200-179385800 Enhancers Fetal Muscle Leg muscle
10 chr3:179383400-179386600 Enhancers Left Ventricle heart
11 chr3:179383800-179385200 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr3:179383800-179385400 Enhancers Ovary ovary
13 chr3:179383800-179385400 Enhancers Right Atrium heart
14 chr3:179383800-179385600 Enhancers Fetal Brain Female brain
15 chr3:179383800-179385600 Enhancers Right Ventricle heart
16 chr3:179384000-179385400 Enhancers Pancreas Pancrea
17 chr3:179384200-179386000 Weak transcription HepG2 liver
18 chr3:179384400-179387800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr3:179384400-179390600 Weak transcription H9 Cell Line embryonic stem cell
20 chr3:179384400-179410400 Weak transcription Rectal Smooth Muscle rectum
21 chr3:179384600-179385400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr3:179384600-179387800 Weak transcription Lung lung
23 chr3:179384600-179388800 Weak transcription HUVEC blood vessel
24 chr3:179384600-179389000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr3:179384600-179390600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr3:179384600-179397600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr3:179384800-179385400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr3:179384800-179386000 Enhancers Brain Germinal Matrix brain
29 chr3:179384800-179387600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr3:179384800-179387600 Weak transcription Psoas Muscle Psoas
31 chr3:179384800-179387600 Weak transcription NHLF lung
32 chr3:179384800-179387800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr3:179384800-179389600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:179384800-179389600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr3:179384800-179389600 Weak transcription Fetal Lung lung
36 chr3:179384800-179389800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr3:179384800-179390200 Weak transcription Fetal Muscle Trunk muscle
38 chr3:179384800-179390600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr3:179384800-179402200 Weak transcription Fetal Stomach stomach
40 chr3:179384800-179406200 Weak transcription HSMM muscle
41 chr3:179384800-179408000 Weak transcription Fetal Thymus thymus
42 chr3:179384800-179415200 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr3:179384800-179425000 Weak transcription Brain Anterior Caudate brain
44 chr3:179384800-179428400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr3:179384800-179443800 Weak transcription Esophagus oesophagus
46 chr3:179385000-179387800 Weak transcription Adipose Nuclei Adipose
47 chr3:179385000-179387800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr3:179385000-179387800 Weak transcription Stomach Smooth Muscle stomach
49 chr3:179385000-179388400 Enhancers Skeletal Muscle Female skeletal muscle
50 chr3:179385000-179389200 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015