Variant report

Variant	rs551919982
Chromosome Location	chr15:34035200-34035201
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:34030460..34032334-chr15:34033934..34035565,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043046	chr15:33714908-34321330	Enhancers Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
2	esv34037	chr15:33732616-34049083	Enhancers ZNF genes & repeats Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv456789	chr15:34034421-34426618	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv568920	chr15:34034421-34426618	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34025400-34035200	Weak transcription	Fetal Muscle Leg	muscle
2	chr15:34030400-34038000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr15:34030600-34038200	Weak transcription	Brain Cingulate Gyrus	brain
4	chr15:34030600-34038200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr15:34030800-34035200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr15:34030800-34038200	Weak transcription	Brain Hippocampus Middle	brain
7	chr15:34030800-34040000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr15:34032400-34041000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr15:34033000-34035400	Weak transcription	Fetal Muscle Trunk	muscle
10	chr15:34034200-34035400	Enhancers	Fetal Brain Male	brain
11	chr15:34034200-34035400	Enhancers	Psoas Muscle	Psoas
12	chr15:34034200-34035600	Enhancers	Fetal Stomach	stomach
13	chr15:34034200-34035600	Enhancers	Skeletal Muscle Female	skeletal muscle
14	chr15:34034200-34035600	Enhancers	HSMMtube	muscle
15	chr15:34034200-34035800	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr15:34034400-34035400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr15:34034400-34035400	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr15:34034400-34035400	Enhancers	Fetal Brain Female	brain
19	chr15:34034400-34035600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr15:34034600-34035200	Enhancers	Brain Anterior Caudate	brain
21	chr15:34034600-34035600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr15:34034600-34048600	Weak transcription	Aorta	Aorta
23	chr15:34034800-34035400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr15:34034800-34035400	Enhancers	Duodenum Smooth Muscle	Duodenum
25	chr15:34034800-34035600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr15:34034800-34038000	Weak transcription	Brain Substantia Nigra	brain
27	chr15:34034800-34042200	Weak transcription	Brain Germinal Matrix	brain
28	chr15:34034800-34050400	Weak transcription	Colon Smooth Muscle	Colon
29	chr15:34035000-34035400	Enhancers	Fetal Lung	lung
30	chr15:34035000-34035800	Weak transcription	Stomach Smooth Muscle	stomach
31	chr15:34035200-34035600	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr15:34035200-34036000	Genic enhancers	Fetal Muscle Leg	muscle
33	chr15:34035200-34038400	Weak transcription	Brain Anterior Caudate	brain

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