The 2.0 version of rSNPBase

Variant report

Variant rs551922640
Chromosome Location chr11:10259510-10259511
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10235400-10263400 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr11:10240600-10259800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr11:10252200-10264200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr11:10253000-10268200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr11:10254000-10259800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr11:10254000-10263400 Weak transcription Ovary ovary
7 chr11:10254000-10276200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:10254400-10277400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr11:10254600-10265800 Weak transcription Fetal Lung lung
10 chr11:10254600-10268800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr11:10255600-10261600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr11:10255600-10261600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr11:10255600-10268400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr11:10255600-10268400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr11:10255600-10268400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr11:10255600-10277200 Weak transcription Primary hematopoietic stem cells blood
17 chr11:10255600-10279000 Weak transcription Small Intestine intestine
18 chr11:10255800-10266200 Weak transcription Osteobl bone
19 chr11:10255800-10268400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr11:10255800-10277400 Weak transcription HSMM muscle
21 chr11:10256000-10261600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr11:10256000-10265600 Weak transcription Muscle Satellite Cultured Cells --
23 chr11:10256000-10270800 Weak transcription NH-A brain
24 chr11:10256200-10262000 Weak transcription NHDF-Ad bronchial
25 chr11:10256400-10268400 Weak transcription NHLF lung
26 chr11:10256600-10263400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr11:10256600-10269600 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr11:10256800-10261800 Weak transcription NHEK skin
29 chr11:10257200-10261400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr11:10257800-10261200 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr11:10257800-10266400 Weak transcription Fetal Stomach stomach
32 chr11:10257800-10269000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr11:10258000-10266400 Weak transcription Fetal Intestine Small intestine
34 chr11:10258800-10261400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr11:10259000-10261600 Weak transcription Hela-S3 cervix
36 chr11:10259000-10263400 Weak transcription Adipose Nuclei Adipose
37 chr11:10259000-10266400 Weak transcription Right Ventricle heart
38 chr11:10259000-10268400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr11:10259200-10266400 Weak transcription Aorta Aorta
40 chr11:10259200-10280200 Weak transcription A549 lung
41 chr11:10259400-10260000 Enhancers Left Ventricle heart
42 chr11:10259400-10268200 Weak transcription Lung lung

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Last update: Aug 31, 2015