Variant report

Variant rs551929678
Chromosome Location chr4:119552399-119552400
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:119513400-119554000 Weak transcription Colon Smooth Muscle Colon
2 chr4:119513400-119554800 Weak transcription Ovary ovary
3 chr4:119513400-119557200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr4:119513600-119552400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:119513600-119552400 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr4:119513600-119552400 Weak transcription Fetal Brain Female brain
7 chr4:119513600-119552400 Weak transcription Lung lung
8 chr4:119513600-119552400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr4:119513600-119554000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr4:119513600-119555800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr4:119513600-119559200 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr4:119513800-119552400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr4:119513800-119555000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr4:119513800-119556000 Weak transcription Fetal Lung lung
15 chr4:119518400-119552600 Weak transcription H9 Cell Line embryonic stem cell
16 chr4:119518800-119557000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr4:119519400-119552400 Weak transcription Primary T cells fromperipheralblood blood
18 chr4:119519600-119552400 Weak transcription Brain Angular Gyrus brain
19 chr4:119519800-119552600 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr4:119519800-119559000 Weak transcription Brain Hippocampus Middle brain
21 chr4:119520600-119552400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr4:119520800-119552400 Weak transcription Right Ventricle heart
23 chr4:119521200-119552400 Weak transcription Placenta Placenta
24 chr4:119526000-119556200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr4:119527600-119552400 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr4:119527800-119555800 Weak transcription Primary B cells from peripheral blood blood
27 chr4:119528200-119552400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:119528800-119558000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr4:119538600-119555200 Weak transcription Brain Germinal Matrix brain
30 chr4:119542000-119557200 Weak transcription Muscle Satellite Cultured Cells --
31 chr4:119542600-119554400 Weak transcription Rectal Smooth Muscle rectum
32 chr4:119544600-119554600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr4:119545400-119552400 Weak transcription Brain Substantia Nigra brain
34 chr4:119546800-119552400 Weak transcription Primary T cells from cord blood blood
35 chr4:119547400-119555600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr4:119547600-119552400 Weak transcription Aorta Aorta
37 chr4:119547800-119552800 Weak transcription Brain Cingulate Gyrus brain
38 chr4:119548600-119552800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr4:119548800-119554600 Strong transcription Liver Liver
40 chr4:119549000-119554800 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr4:119549000-119554800 Weak transcription NH-A brain
42 chr4:119549000-119556000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:119549200-119553600 Strong transcription Fetal Muscle Leg muscle
44 chr4:119549200-119555800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:119549200-119555800 Strong transcription Spleen Spleen
46 chr4:119549200-119557800 Strong transcription Fetal Stomach stomach
47 chr4:119549400-119553000 Strong transcription Fetal Intestine Large intestine
48 chr4:119549400-119556600 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr4:119549600-119557600 Strong transcription Fetal Intestine Small intestine
50 chr4:119550000-119555800 Strong transcription Primary hematopoietic stem cells short term culture blood

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