Variant report

Variant rs551947207
Chromosome Location chr6:32155660-32155661
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32146800-32156600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr6:32147200-32156400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr6:32147600-32156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr6:32147600-32156200 Genic enhancers Primary T cells fromperipheralblood blood
5 chr6:32149800-32156600 Weak transcription Stomach Mucosa stomach
6 chr6:32150200-32156200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr6:32151000-32156400 Weak transcription Ovary ovary
8 chr6:32151400-32155800 Weak transcription HSMM muscle
9 chr6:32152400-32156200 Weak transcription Hela-S3 cervix
10 chr6:32152400-32160600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr6:32153400-32155800 Strong transcription Sigmoid Colon Sigmoid Colon
12 chr6:32153400-32156000 Genic enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:32153600-32155800 Genic enhancers Fetal Muscle Trunk muscle
14 chr6:32153600-32155800 Genic enhancers Fetal Muscle Leg muscle
15 chr6:32153600-32156000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
16 chr6:32153600-32156000 Genic enhancers Fetal Stomach stomach
17 chr6:32153600-32156000 Weak transcription NH-A brain
18 chr6:32153600-32156200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr6:32153600-32156200 Genic enhancers Primary monocytes fromperipheralblood blood
20 chr6:32153600-32156200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr6:32153800-32155800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:32153800-32155800 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr6:32153800-32155800 Strong transcription iPS-20b Cell Line embryonic stem cell
24 chr6:32153800-32155800 Genic enhancers Breast Myoepithelial Primary Cells Breast
25 chr6:32153800-32155800 Strong transcription Brain Cingulate Gyrus brain
26 chr6:32153800-32155800 Genic enhancers Colon Smooth Muscle Colon
27 chr6:32153800-32155800 Genic enhancers Fetal Intestine Small intestine
28 chr6:32153800-32155800 Genic enhancers Fetal Kidney kidney
29 chr6:32153800-32155800 Enhancers Right Atrium heart
30 chr6:32153800-32156000 Strong transcription iPS-18 Cell Line embryonic stem cell
31 chr6:32153800-32156000 Genic enhancers Primary T killer memory cells from peripheral blood blood
32 chr6:32153800-32156000 Genic enhancers Duodenum Smooth Muscle Duodenum
33 chr6:32153800-32156000 Genic enhancers Fetal Intestine Large intestine
34 chr6:32153800-32156000 Genic enhancers Fetal Lung lung
35 chr6:32153800-32156000 Strong transcription HMEC breast
36 chr6:32153800-32156200 Genic enhancers Placenta Placenta
37 chr6:32153800-32156200 Genic enhancers Fetal Thymus thymus
38 chr6:32153800-32156400 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr6:32153800-32156400 Genic enhancers Spleen Spleen
40 chr6:32154000-32155800 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr6:32154000-32155800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:32154000-32155800 Strong transcription NHEK skin
43 chr6:32154000-32155800 Strong transcription Osteobl bone
44 chr6:32154000-32156000 Strong transcription H1 Cell Line embryonic stem cell
45 chr6:32154000-32156000 Strong transcription HUES6 Cell Line embryonic stem cell
46 chr6:32154000-32156000 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
47 chr6:32154000-32156000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr6:32154000-32156000 Genic enhancers Rectal Mucosa Donor 29 rectum
49 chr6:32154000-32156000 Genic enhancers Skeletal Muscle Female skeletal muscle
50 chr6:32154000-32156200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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