Variant report

Variant	rs551970368
Chromosome Location	chr15:75283368-75283369
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:11 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569993	chr15:75242155-75483752	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
2	nsv542435	chr15:75271788-75321117	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	esv1976733	chr15:75283168-75283654	Active TSS Weak transcription Enhancers Bivalent Enhancer	TF binding region	1 gene(s)	inside rSNPs	diseases
4	esv4606	chr15:75283208-75283571	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv3495394	chr15:75283209-75283602	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3384609	chr15:75283213-75283566	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3495398	chr15:75283230-75283528	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3311426	chr15:75283261-75283528	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3311427	chr15:75283261-75283528	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv1100949	chr15:75283321-75283452	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3495399	chr15:75283360-75283515	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75282600-75283400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr15:75282800-75283400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr15:75282800-75283400	Enhancers	HMEC	breast
4	chr15:75282800-75283400	Enhancers	NHEK	skin
5	chr15:75283200-75283800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr15:75283200-75287400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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