The 2.0 version of rSNPBase

Variant report

Variant rs552022352
Chromosome Location chr12:63039430-63039431
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:63026600-63049800 Weak transcription Right Atrium heart
2 chr12:63030000-63040400 Weak transcription Brain Hippocampus Middle brain
3 chr12:63030000-63040800 Weak transcription Brain Angular Gyrus brain
4 chr12:63030400-63040200 Weak transcription Brain Inferior Temporal Lobe brain
5 chr12:63030400-63040600 Weak transcription Brain Substantia Nigra brain
6 chr12:63030400-63040800 Weak transcription Brain Anterior Caudate brain
7 chr12:63031600-63041000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr12:63031800-63040200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr12:63031800-63047000 Weak transcription Liver Liver
10 chr12:63034400-63041000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr12:63034400-63042000 Weak transcription Gastric stomach
12 chr12:63034400-63043200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr12:63035000-63048000 Weak transcription Primary hematopoietic stem cells blood
14 chr12:63035200-63041400 Weak transcription Adipose Nuclei Adipose
15 chr12:63035200-63041400 Weak transcription Osteobl bone
16 chr12:63035200-63043200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:63035200-63048400 Weak transcription Fetal Muscle Leg muscle
18 chr12:63035200-63069800 Weak transcription Left Ventricle heart
19 chr12:63035400-63040600 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr12:63035600-63040400 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr12:63035600-63041200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr12:63035600-63042200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr12:63035600-63043200 Weak transcription A549 lung
24 chr12:63035600-63044200 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr12:63036200-63040800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr12:63036400-63044000 Weak transcription Duodenum Mucosa Duodenum
27 chr12:63036800-63040400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr12:63037200-63041600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr12:63037200-63050800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:63037200-63069600 Weak transcription Fetal Intestine Large intestine
31 chr12:63037400-63041400 Weak transcription Fetal Muscle Trunk muscle
32 chr12:63037600-63041200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr12:63038200-63043200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr12:63038400-63039600 Enhancers iPS-15b Cell Line embryonic stem cell
35 chr12:63038400-63040000 Enhancers HUES6 Cell Line embryonic stem cell
36 chr12:63038400-63041200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr12:63038600-63039600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr12:63038600-63039800 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr12:63038600-63040200 Weak transcription Fetal Intestine Small intestine
40 chr12:63038600-63041400 Weak transcription Fetal Stomach stomach
41 chr12:63038600-63043400 Strong transcription HepG2 liver
42 chr12:63039000-63039800 Enhancers Breast Myoepithelial Primary Cells Breast
43 chr12:63039000-63042000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr12:63039200-63042600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:63039200-63070000 Weak transcription Pancreas Pancrea
46 chr12:63039400-63040200 Weak transcription H9 Cell Line embryonic stem cell
47 chr12:63039400-63040400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr12:63039400-63040400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
49 chr12:63039400-63040800 Weak transcription H1 Cell Line embryonic stem cell
50 chr12:63039400-63041200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015